4RGP

Crystal Structure of Uncharacterized CRISPR/Cas System-associated Protein Csm6 from Streptococcus mutans

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyCas_Csm6 helical domain-like 8045355 4004432 SCOP2 (2021-05-27)
ASCOP2 SuperfamilyTPR-like 8090318 3001345 SCOP2 (2021-05-27)
ASCOP2 SuperfamilyHEPN domain-like 8090354 3000904 SCOP2 (2021-05-27)
BSCOP2B SuperfamilyTPR-like 8090318 3001345 SCOP2B (2021-05-27)
BSCOP2B SuperfamilyHEPN domain-like 8090354 3000904 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF09659e4rgpA2 A: alpha bundlesX: Four-helical up-and-down bundleH: HEPNT: Nucleotidyltransferase substrate binding subunit/domainF: PF09659ECOD (1.6)
AF_UNCLASSIFIEDe4rgpA1 A: alpha bundlesX: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology)H: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology)T: CRISPR/Cas system-associated protein Csm6 6H domainF: F_UNCLASSIFIEDECOD (1.6)
BPF09659e4rgpB1 A: alpha bundlesX: Four-helical up-and-down bundleH: HEPNT: Nucleotidyltransferase substrate binding subunit/domainF: PF09659ECOD (1.6)
BF_UNCLASSIFIEDe4rgpB2 A: alpha bundlesX: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology)H: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology)T: CRISPR/Cas system-associated protein Csm6 6H domainF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF09659Cas_Csm6 HEPN domain (Cas_Csm6_HEPN)Cas_Csm6 HEPN domainThis entry represents the HEPN domain of Csm6 from bacteria (i.e Enterococcus italicus), a Cas (CRISPR-associated) protein from type III-A CRISPR-Cas system. It consists of a CARF domain at the N-terminal, a six-helix domain and a C-terminal HEPN dom ...This entry represents the HEPN domain of Csm6 from bacteria (i.e Enterococcus italicus), a Cas (CRISPR-associated) protein from type III-A CRISPR-Cas system. It consists of a CARF domain at the N-terminal, a six-helix domain and a C-terminal HEPN domain at the C-terminal, which has RNase activity [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Csm6_III-A - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR013489CRISPR-associated protein Csm6Family