Crystal Structure of Putative Phytanoyl-CoA Dioxygenase Family Protein YbiU from Yersinia pestis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d4rgka1 | All beta proteins | Double-stranded beta-helix | Clavaminate synthase-like | automated matches | automated matches | (Yersinia pestis ) [TaxId: 632 ], | SCOPe (2.08) |
| A | d4rgka2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Yersinia pestis ) [TaxId: 632 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Ank, Ank_2, Ank_3, Ank_4 | e4rgkA1 | A: beta barrels | X: CCHC-type 1 zinc finger | H: Retrovirus zinc finger-related domains | T: Retrovirus zinc finger-related domains | F: Ank, Ank_2, Ank_3, Ank_4 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.120.330 | Mainly Beta | Sandwich | Jelly Rolls | B-lactam Antibiotic, Isopenicillin N Synthase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF07350 | Gig2-like (Gig2-like) | Gig2-like | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Uncharacterized protein | - | - |














