4RDV
The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF22429 | e4rdvA2 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: PF22429 | ECOD (1.6) |
A | PF01979 | e4rdvA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01979 | ECOD (1.6) |
B | PF22429 | e4rdvB1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: PF22429 | ECOD (1.6) |
B | PF01979 | e4rdvB2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01979 | ECOD (1.6) |
C | PF22429 | e4rdvC1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: PF22429 | ECOD (1.6) |
C | PF01979 | e4rdvC2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01979 | ECOD (1.6) |
D | PF22429 | e4rdvD1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: PF22429 | ECOD (1.6) |
D | PF01979 | e4rdvD2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01979 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.40.10 | Mainly Beta | Roll | Urease, subunit C | domain 1 | CATH (4.3.0) |
A | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (4.3.0) |
B | 2.30.40.10 | Mainly Beta | Roll | Urease, subunit C | domain 1 | CATH (4.3.0) |
B | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (4.3.0) |
C | 2.30.40.10 | Mainly Beta | Roll | Urease, subunit C | domain 1 | CATH (4.3.0) |
C | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (4.3.0) |
D | 2.30.40.10 | Mainly Beta | Roll | Urease, subunit C | domain 1 | CATH (4.3.0) |
D | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01979 | Amidohydrolase family (Amidohydro_1) | Amidohydrolase family | This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisatio ... | Domain | |
PF22429 | Amidohydrolase BAB2_0307-like, N-terminal domain (BAB2_0307-like_N) | Amidohydrolase BAB2_0307-like, N-terminal domain | This small domain is found at the N-terminal end of Amidohydrolase from Brucella abortus (BAB2_0307, Swiss:Q2YIL4) and similar proteins predominantly found in proteobacteria. This domain shows an all-beta structure. | Domain |