4QF0
Structure of a 16 nm protein cage designed by fusing symmetric oligomeric domains, quadruple mutant, P21212 form
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Influenza virus matrix protein M1-like | 8038312 | 3000900 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | alpha/beta-Hydrolases | 8032554 | 3000102 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Influenza virus matrix protein M1-like | 8038312 | 3000900 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | alpha/beta-Hydrolases | 8032554 | 3000102 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | alpha/beta-Hydrolases | 8032554 | 3000102 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Influenza virus matrix protein M1-like | 8038312 | 3000900 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | alpha/beta-Hydrolases | 8032554 | 3000102 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Influenza virus matrix protein M1-like | 8038312 | 3000900 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | alpha/beta-Hydrolases | 8032554 | 3000102 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Influenza virus matrix protein M1-like | 8038312 | 3000900 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | alpha/beta-Hydrolases | 8032554 | 3000102 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Influenza virus matrix protein M1-like | 8038312 | 3000900 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Flu_M1 | e4qf0A2 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
A | Hydrolase_4_1 | e4qf0A1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: Hydrolase_4_1 | ECOD (1.6) |
B | Flu_M1 | e4qf0B1 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
B | Hydrolase_4_1 | e4qf0B2 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: Hydrolase_4_1 | ECOD (1.6) |
C | Flu_M1 | e4qf0C2 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
C | Hydrolase_4_1 | e4qf0C1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: Hydrolase_4_1 | ECOD (1.6) |
D | Flu_M1 | e4qf0D2 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
D | Hydrolase_4_1 | e4qf0D1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: Hydrolase_4_1 | ECOD (1.6) |
E | Flu_M1 | e4qf0E2 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
E | Hydrolase_4_1 | e4qf0E1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: Hydrolase_4_1 | ECOD (1.6) |
F | Flu_M1 | e4qf0F2 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
F | Hydrolase_4_1 | e4qf0F1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: Hydrolase_4_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00561 | alpha/beta hydrolase fold (Abhydrolase_1) | alpha/beta hydrolase fold | This catalytic domain is found in a very wide range of enzymes. | Domain | |
PF00598 | Influenza Matrix protein (M1) (Flu_M1) | Influenza Matrix protein (M1) | This protein forms a continuous shell on the inner side of the lipid bilayer, but its function is unclear. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050471 | AB hydrolase | Family | |
IPR000639 | Epoxide hydrolase-like | Family | |
IPR000073 | Alpha/beta hydrolase fold-1 | Domain | |
IPR029058 | Alpha/Beta hydrolase fold | Homologous Superfamily | |
IPR015799 | Influenza matrix M1, N-terminal subdomain 2 | Homologous Superfamily | |
IPR015423 | Influenza matrix M1, N-terminal subdomain 1 | Homologous Superfamily | |
IPR036039 | Influenza virus matrix protein M1 | Homologous Superfamily | |
IPR013188 | Influenza matrix M1, C-terminal | Domain | |
IPR001561 | Influenza matrix M1, N-terminal | Domain | |
IPR037533 | Matrix protein 1 | Family |