4QC8
Structural annotation of pathogenic bovine Parvovirus-1
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Parvo_coat | e4qc8A1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Parvo_coat | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.30.10 | Mainly Beta | Beta Complex | Empty Capsid Viral Protein 2 | Parvovirus coat protein VP1/VP2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00740 | Parvovirus coat protein VP2 (Parvo_coat) | Parvovirus coat protein VP2 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
VP2 | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016184 | Capsid/spike protein, ssDNA virus | Homologous Superfamily | |
IPR036952 | Parvovirus coat protein VP1/VP2 | Homologous Superfamily | |
IPR001403 | Parvovirus coat protein VP2 | Domain |