4P6I
Crystal structure of the Cas1-Cas2 complex from Escherichia coli
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Cas2-like | 8090691 | 3001363 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cas2-like | 8090691 | 3001363 | SCOP2B (2022-06-29) |
C | SCOP2 Family | CRISPR associated protein Cas1 | 8049652 | 4006578 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Cas_Cas2CT1978 | e4p6iA1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: Cas_Cas2CT1978 | ECOD (1.6) |
B | Cas_Cas2CT1978 | e4p6iB1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: Cas_Cas2CT1978 | ECOD (1.6) |
C | Cas_Cas1 | e4p6iC1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: Cas_Cas1 | ECOD (1.6) |
D | Cas_Cas1 | e4p6iD1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: Cas_Cas1 | ECOD (1.6) |
E | Cas_Cas1 | e4p6iE1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: Cas_Cas1 | ECOD (1.6) |
F | Cas_Cas1 | e4p6iF1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: Cas_Cas1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09707 | CRISPR-associated protein (Cas_Cas2CT1978) (Cas_Cas2CT1978) | CRISPR-associated protein (Cas_Cas2CT1978) | - | Family | |
PF01867 | CRISPR associated protein Cas1 (Cas_Cas1) | CRISPR associated protein Cas1 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR010152 | CRISPR-associated protein Cas2 subtype | Family | |
IPR002729 | CRISPR-associated protein Cas1 | Family | |
IPR033641 | CRISPR-associated protein Cas1, type I-E | Family | |
IPR042206 | CRISPR-associated endonuclease Cas1, C-terminal domain | Homologous Superfamily | |
IPR042211 | CRISPR-associated endonuclease Cas1, N-terminal domain | Homologous Superfamily | |
IPR019851 | CRISPR-associated protein Cas1, ECOLI subtype | Family | |
IPR050646 | CRISPR-associated endonuclease Cas1 | Family |