4OSH
Crystal structure of the TAL effector dHax3 with NI RVD at 2.2 angstrom resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d4oshb1 | All alpha proteins | Left-handed alpha-alpha superhelix | TAL effector-like | TAL (transcription activator-like) effector | automated matches | (Xanthomonas campestris pv. armoraciae ) [TaxId: 329463 ], | SCOPe (2.08) |
A [auth B] | d4oshb2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Xanthomonas campestris pv. armoraciae ) [TaxId: 329463 ], | SCOPe (2.08) |
D [auth A] | d4osha_ | All alpha proteins | Left-handed alpha-alpha superhelix | TAL effector-like | TAL (transcription activator-like) effector | automated matches | (Xanthomonas campestris pv. armoraciae ) [TaxId: 329463 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | TAL_effector | e4oshB1 | A: alpha superhelices | X: Mitochondrial mTERF-like | H: Transcription activator-like effector (TALE) (From Topology) | T: Transcription activator-like effector (TALE) | F: TAL_effector | ECOD (1.6) |
D [auth A] | TAL_effector | e4oshA1 | A: alpha superhelices | X: Mitochondrial mTERF-like | H: Transcription activator-like effector (TALE) (From Topology) | T: Transcription activator-like effector (TALE) | F: TAL_effector | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], D [auth A] | PF03377 | TAL effector repeat (TAL_effector) | TAL effector repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth B], D [auth A] | Hax3 | - | - | |
B [auth G], E [auth I] | DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3') | - | - | - |
C [auth H], F [auth J] | DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3') | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], D [auth A] | IPR053450 | Transcription activator-like effector protein | Family |
A [auth B], D [auth A] | IPR005042 | TAL effector repeat | Repeat |