4OKC
Structure, interactions and evolutionary implications of a domain-swapped lectin dimer from Mycobacterium smegmatis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4okca1 | All beta proteins | beta-Prism II | alpha-D-mannose-specific plant lectins | automated matches | automated matches | (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], | SCOPe (2.08) |
A | d4okca2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], | SCOPe (2.08) |
B | d4okcb1 | All beta proteins | beta-Prism II | alpha-D-mannose-specific plant lectins | automated matches | automated matches | (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], | SCOPe (2.08) |
B | d4okcb2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | B_lectin | e4okcA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-Prism II (From Topology) | T: beta-Prism II | F: B_lectin | ECOD (1.6) |
B | B_lectin | e4okcB1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-Prism II (From Topology) | T: beta-Prism II | F: B_lectin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.90.10.10 | Mainly Beta | Orthogonal Prism | Agglutinin, subunit A | Bulb-type lectin domain | CATH (4.3.0) |
B | 2.90.10.10 | Mainly Beta | Orthogonal Prism | Agglutinin, subunit A | Bulb-type lectin domain | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001480 | Bulb-type lectin domain | Domain | |
IPR036779 | LysM domain superfamily | Homologous Superfamily | |
IPR036426 | Bulb-type lectin domain superfamily | Homologous Superfamily | |
IPR018392 | LysM domain | Domain |