4OIY
Crystal structure of Sec7p catalytic domain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4oiya1 | All alpha proteins | alpha-alpha superhelix | Sec7 domain | automated matches | automated matches | yeast (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], | SCOPe (2.08) |
A | d4oiya2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | yeast (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], | SCOPe (2.08) |
B | d4oiyb_ | All alpha proteins | alpha-alpha superhelix | Sec7 domain | automated matches | automated matches | yeast (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Sec7 | e4oiyA1 | A: alpha arrays | X: Sec7 domain (From Topology) | H: Sec7 domain (From Topology) | T: Sec7 domain | F: Sec7 | ECOD (1.6) |
B | Sec7 | e4oiyB1 | A: alpha arrays | X: Sec7 domain (From Topology) | H: Sec7 domain (From Topology) | T: Sec7 domain | F: Sec7 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.220.20 | Mainly Alpha | Orthogonal Bundle | Annexin V | domain 1 | CATH (4.3.0) |
A | 1.10.1000.11 | Mainly Alpha | Orthogonal Bundle | Arf Nucleotide-binding Site Opener | domain 2 | CATH (4.3.0) |
B | 1.10.220.20 | Mainly Alpha | Orthogonal Bundle | Annexin V | domain 1 | CATH (4.3.0) |
B | 1.10.1000.11 | Mainly Alpha | Orthogonal Bundle | Arf Nucleotide-binding Site Opener | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01369 | Sec7 domain (Sec7) | Sec7 domain | The Sec7 domain is a guanine-nucleotide-exchange-factor (GEF) for the Pfam:PF00025 family [2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR046455 | Sec7/BIG1-like, C-terminal domain | Domain | |
IPR000904 | Sec7 domain | Domain | |
IPR032691 | Mon2/Sec7/BIG1-like, HUS domain | Domain | |
IPR023394 | Sec7, C-terminal domain superfamily | Homologous Superfamily | |
IPR032629 | Mon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domain | Domain | |
IPR015403 | Mon2/Sec7/BIG1-like, HDS | Domain | |
IPR035999 | Sec7 domain superfamily | Homologous Superfamily |