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4OGU
The effects of Lysine 200 and Phenylalanine 239 Farnesyl Pyrophosphate Synthase (FPPS) mutations on the catalytic activity, crystal structure and inhibition by nitrogen containing bisphosphonates
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Domain Annotation: SCOP/SCOPe Classification
SCOP-e Database Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
Provenance Source (Version)
A
d4ogua_
All alpha proteins
Terpenoid synthases
Terpenoid synthases
Isoprenyl diphosphate synthases
automated matches
human
(
Homo sapiens
) [TaxId:
9606
],
SCOPe (2.08)
Domain Annotation: SCOP2 Classification
SCOP2 Database Homepage
Chains
Type
Family Name
Domain Identifier
Family Identifier
Provenance Source (Version)
A
SCOP2B Superfamily
Terpenoid synthases
8073826
3001615
SCOP2B (2021-05-27)
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
A
PF00348
e4oguA1
A: alpha bundles
X: Terpenoid synthases (From Topology)
H: Terpenoid synthases (From Topology)
T: Terpenoid synthases
F: PF00348
ECOD (1.6)
Domain Annotation: CATH
CATH Database Homepage
Chain
Domain
Class
Architecture
Topology
Homology
Provenance Source (Version)
A
1.10.600.10
Mainly Alpha
Orthogonal Bundle
Farnesyl Diphosphate Synthase
Farnesyl Diphosphate Synthase
CATH (4.3.0)
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
PF00348
Polyprenyl synthetase (polyprenyl_synt)
Polyprenyl synthetase
-
Domain
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
Farnesyl pyrophosphate synthase
dimethylallyltranstransferase activity
prenyltransferase activity
transferase activity
transferase activity, transferring alkyl or aryl (other than methyl) groups
catalytic activity
geranyltranstransferase activity
RNA binding
binding
organic cyclic compound binding
nucleic acid binding
cation binding
ion binding
metal ion binding
small molecule binding
isoprenoid biosynthetic process
cellular biosynthetic process
cellular metabolic process
lipid biosynthetic process
primary metabolic process
terpenoid biosynthetic process
phospholipid biosynthetic process
farnesyl diphosphate metabolic process
phospholipid metabolic process
biosynthetic process
farnesyl diphosphate biosynthetic process
organophosphate metabolic process
organophosphate biosynthetic process
cellular lipid metabolic process
phosphate-containing compound metabolic process
isoprenoid biosynthetic process
cellular biosynthetic process
cellular metabolic process
lipid biosynthetic process
primary metabolic process
terpenoid biosynthetic process
phospholipid biosynthetic process
farnesyl diphosphate metabolic process
phospholipid metabolic process
biosynthetic process
farnesyl diphosphate biosynthetic process
organophosphate metabolic process
organophosphate biosynthetic process
cellular lipid metabolic process
phosphate-containing compound metabolic process
metabolic process
cellular process
phosphorus metabolic process
terpenoid metabolic process
lipid metabolic process
isoprenoid metabolic process
geranyl diphosphate biosynthetic process
geranyl diphosphate metabolic process
secondary alcohol biosynthetic process
small molecule biosynthetic process
cholesterol biosynthetic process
organic hydroxy compound metabolic process
sterol metabolic process
steroid metabolic process
cholesterol metabolic process
alcohol metabolic process
secondary alcohol metabolic process
sterol biosynthetic process
organic hydroxy compound biosynthetic process
alcohol biosynthetic process
small molecule metabolic process
steroid biosynthetic process
Less
intracellular anatomical structure
cytoplasm
cellular anatomical entity
cytosol
membrane-bounded organelle
nucleus
membrane-enclosed lumen
intracellular membrane-bounded organelle
intracellular organelle lumen
intracellular organelle
nucleoplasm
organelle lumen
organelle
nuclear lumen
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR039702
Farnesyl pyrophosphate synthase-like
Family
A
IPR000092
Polyprenyl synthetase
Family
A
IPR008949
Isoprenoid synthase domain superfamily
Homologous Superfamily
A
IPR033749
Polyprenyl synthetase, conserved site
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