4OEC
Crystal structure of glycerophosphodiester phosphodiesterase from Thermococcus kodakarensis KOD1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4oeca_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | PLC-like phosphodiesterases | automated matches | automated matches | (Thermococcus kodakarensis KOD1 ) [TaxId: 69014 ], | SCOPe (2.08) |
B | d4oecb_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | PLC-like phosphodiesterases | automated matches | automated matches | (Thermococcus kodakarensis KOD1 ) [TaxId: 69014 ], | SCOPe (2.08) |
C | d4oecc_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | PLC-like phosphodiesterases | automated matches | automated matches | (Thermococcus kodakarensis KOD1 ) [TaxId: 69014 ], | SCOPe (2.08) |
D | d4oecd_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | PLC-like phosphodiesterases | automated matches | automated matches | (Thermococcus kodakarensis KOD1 ) [TaxId: 69014 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Glycerophosphoryl diester phosphodiesterase | 8085637 | 4000418 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | PLC-like phosphodiesterases | 8085638 | 3000615 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | PLC-like phosphodiesterases | 8085638 | 3000615 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PLC-like phosphodiesterases | 8085638 | 3000615 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | PLC-like phosphodiesterases | 8085638 | 3000615 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GDPD | e4oecA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: GDPD | ECOD (1.6) |
B | GDPD | e4oecB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: GDPD | ECOD (1.6) |
C | GDPD | e4oecC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: GDPD | ECOD (1.6) |
D | GDPD | e4oecD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: GDPD | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.190 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Phosphatidylinositol (PI) phosphodiesterase | CATH (4.3.0) |
B | 3.20.20.190 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Phosphatidylinositol (PI) phosphodiesterase | CATH (4.3.0) |
C | 3.20.20.190 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Phosphatidylinositol (PI) phosphodiesterase | CATH (4.3.0) |
D | 3.20.20.190 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Phosphatidylinositol (PI) phosphodiesterase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Glycerophosphoryl diester phosphodiesterase | - |