Crystal structure of SabA from Helicobacter pylori
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d4o5ja_ | Membrane and cell surface proteins and peptides | Extracellular adhesion domain of SabA-like | Extracellular adhesion domain of SabA-like | Extracellular adhesion domain of SabA | Sialic acid-binding adhesin SabA | (Helicobacter pylori 26695 ) [TaxId: 85962 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2 | e4o5jA1 | A: alpha arrays | X: barrel domains in phase 1 flagellin | H: barrel domains in phase 1 flagellin | T: barrel domains in phase 1 flagellin | F: FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2 | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF18304 | SabA N-terminal extracellular adhesion domain (SabA_adhesion) | SabA N-terminal extracellular adhesion domain | This is the N-terminal extracellular adhesion domain of Sialic acid binding adhesin (SabA) present in Helicobacter pylori. The N-terminal domain of SabA functions as a sugar-binding adhesion domain with conserved disulfide bonds. Notably, these amino ... | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR040838 | SabA, N-terminal extracellular adhesion domain | Domain | |
| IPR002718 | Outer membrane protein, Helicobacter | Family |