Crystal structure of the vaccine antigen Transferrin Binding Protein B (TbpB) mutant Tyr-63-Ala from Actinobacillus suis H57
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | N-lobe and C-lobe of Tf-binding protein B-like | 8047020 | 4006246 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | N-lobe and C-lobe of Tf-binding protein B-like | 8048881 | 4006246 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | TbpB N-lobe and C-lobe beta-barrel domains-like | 8047029 | 3002098 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | TbpB N-lobe and C-lobe beta-barrel domains-like | 8052217 | 3002098 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | TbpB N-lobe and C-lobe handle domains-like | 8052218 | 3002099 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | TbpB N-lobe and C-lobe handle domains-like | 8052219 | 3002099 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | TbpB N-lobe and C-lobe beta-barrel domains-like | 8047029 | 3002098 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | TbpB N-lobe and C-lobe beta-barrel domains-like | 8052217 | 3002098 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | TbpB N-lobe and C-lobe handle domains-like | 8052219 | 3002099 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | TbpB N-lobe and C-lobe handle domains-like | 8052218 | 3002099 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Birna_VP4 | e4o3wA1 | A: beta barrels | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: amino-terminal domain of OmpATb | F: Birna_VP4 | ECOD (v294.2) |
| B | Birna_VP4 | e4o3wB1 | A: beta barrels | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: amino-terminal domain of OmpATb | F: Birna_VP4 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.40.128.250 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.3.0) | |
| A | 2.40.160.90 | Mainly Beta | Beta Barrel | Porin | CATH (4.3.0) | |
| A | 2.40.128.240 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.3.0) | |
| B | 2.40.128.250 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.3.0) | |
| B | 2.40.160.90 | Mainly Beta | Beta Barrel | Porin | CATH (4.3.0) | |
| B | 2.40.128.240 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Transferrin binding protein B | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011250 | Outer membrane protein/outer membrane enzyme PagP, beta-barrel | Homologous Superfamily | |
| IPR001677 | Transferrin-binding protein B, C-lobe/N-lobe beta-barrel domain | Domain | |
| IPR035313 | Transferrin-binding protein B, N-lobe handle | Domain | |
| IPR038669 | TbpB, N-lobe handle domain superfamily | Homologous Superfamily | |
| IPR038197 | TbpB, C-lobe handle domain superfamily | Homologous Superfamily | |
| IPR035316 | Transferrin-binding protein B, C-lobe handle domain | Domain |














