4NI9
Crystal structure of human interleukin 6 in complex with a modified nucleotide aptamer (SOMAMER SL1025), FORM 2
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | d4ni9a_ | All alpha proteins | 4-helical cytokines | 4-helical cytokines | Long-chain cytokines | Interleukin-6 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d4ni9c_ | All alpha proteins | 4-helical cytokines | 4-helical cytokines | Long-chain cytokines | Interleukin-6 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | IL6 | e4ni9A1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IL6 | ECOD (1.6) |
C | IL6 | e4ni9C1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IL6 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth A] | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
C | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth A], C | IPR030473 | Interleukin-6/GCSF/MGF, conserved site | Conserved Site |
B [auth A], C | IPR009079 | Four-helical cytokine-like, core | Homologous Superfamily |
B [auth A], C | IPR003574 | Interleukin-6-like | Family |
B [auth A], C | IPR030474 | Interleukin-6/GCSF/MGF | Family |