Skip to main content

 4NI3 | pdb_00004ni3

Crystal Structure of GH29 family alpha-L-fucosidase from Fusarium graminearum in the closed form

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B Superfamilygamma-Crystallin-like 8092878 3001138 SCOP2B (2022-06-29)
BSCOP2B Superfamily(Trans)glycosidases 8092880 3000313 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8092882 3001528 SCOP2B (2022-06-29)
ASCOP2B Superfamily(Trans)glycosidases 8092880 3000313 SCOP2B (2022-06-29)
ASCOP2B Superfamilygamma-Crystallin-like 8092878 3001138 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGlycosyl hydrolase domain-like 8092882 3001528 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BAlpha_L_fucose4ni3B1 A: alpha arraysX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: Alpha_L_fucosECOD (v295.2)
BEF-hand_1, EF-hand_7e4ni3B2 A: alpha arraysX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: EF-hand_1, EF-hand_7ECOD (v295.2)
AOMPdecasee4ni3A1 A: alpha arraysX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: OMPdecaseECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
B2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)
B2.60.20.10 Mainly Beta Sandwich Gamma-B Crystallin domain 1CATH (4.3.0)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)
A2.60.20.10 Mainly Beta Sandwich Gamma-B Crystallin domain 1CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Alpha-fucosidase GH29 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR031919Alpha-L-fucosidase, C-terminalDomain
A, B
IPR011024Gamma-crystallin-likeHomologous Superfamily
A, B
IPR016286Alpha-L-fucosidase, metazoa-typeFamily
A, B
IPR057739Glycoside hydrolase family 29, N-terminalDomain
A, B
IPR017853Glycoside hydrolase superfamilyHomologous Superfamily
A, B
IPR013780Glycosyl hydrolase, all-betaHomologous Superfamily
A, B
IPR000933Glycoside hydrolase, family 29Family