Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyOfd1 C-terminal domain-like 8045290 4004393 SCOP2 (2022-06-29)
ASCOP2 FamilyOfd1 N-terminal domain-like 8049071 4006331 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyClavaminate synthase-like 8089986 3001848 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyClavaminate synthase-like 8089985 3001848 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AOfd1_CTDDe4nhxA2 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: Ofd1_CTDDECOD (1.6)
A2OG-FeII_Oxy_3e4nhxA1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: 2OG-FeII_Oxy_3ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.620 Mainly Beta Sandwich Jelly Rolls q2cbj1_9rhob like domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF136612OG-Fe(II) oxygenase superfamily (2OG-FeII_Oxy_4)2OG-Fe(II) oxygenase superfamilyThis family contains members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [1].Domain
PF10637Oxoglutarate and iron-dependent oxygenase degradation C-term (Ofd1_CTDD)Oxoglutarate and iron-dependent oxygenase degradation C-termOfd1 is a prolyl 4-hydroxylase-like 2-oxoglutarate-Fe(II) dioxygenase that accelerates the degradation of Sre1N in the presence of oxygen. The domain is conserved from yeasts to humans. Yeast Sre1 is the orthologue of mammalian sterol regulatory ele ...Ofd1 is a prolyl 4-hydroxylase-like 2-oxoglutarate-Fe(II) dioxygenase that accelerates the degradation of Sre1N in the presence of oxygen. The domain is conserved from yeasts to humans. Yeast Sre1 is the orthologue of mammalian sterol regulatory element binding protein (SREBP), and it responds to changes in oxygen-dependent sterol synthesis as an indirect measure of oxygen availability. However, unlike the prolyl 4-hydroxylases that regulate mammalian hypoxia-inducible factor, Ofd1 uses multiple domains to regulate Sre1N degradation by oxygen; the Ofd1 N-terminal dioxygenase domain is required for oxygen sensing and this Ofd1 C-terminal domain accelerates Sre1N degradation in yeasts [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1