4NDI
Human Aprataxin (Aptx) AOA1 variant K197Q bound to RNA-DNA, AMP, and Zn - product complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8089891 | 3001077 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | HIT-like | 8089893 | 3000223 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8089891 | 3001077 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | HIT-like | 8089893 | 3000223 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DcpS_C | e4ndiA3 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: DcpS_C | ECOD (1.6) |
A | UNK_F_TYPE | e4ndiA4 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: UNK_F_TYPE | ECOD (1.6) |
B | DcpS_C | e4ndiB3 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: DcpS_C | ECOD (1.6) |
B | UNK_F_TYPE | e4ndiB4 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.428.10 | Alpha Beta | 2-Layer Sandwich | HIT family, subunit A | HIT-like | CATH (4.3.0) |
B | 3.30.428.10 | Alpha Beta | 2-Layer Sandwich | HIT family, subunit A | HIT-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF11969 | Scavenger mRNA decapping enzyme C-term binding (DcpS_C) | Scavenger mRNA decapping enzyme C-term binding | - | Family | |
PF16278 | C2HE / C2H2 / C2HC zinc-binding finger (zf-C2HE) | C2HE / C2H2 / C2HC zinc-binding finger | zf-C2HE is an unusual zinc-binding domain found in fungi, plants and metazoa. It is often found at the C-terminus of HIT-domain-containing proteins, Pfam:PF01230. In fungi the fourth ligand is a Glu, in plants it is Cys and in metazoans it is usually ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013087 | Zinc finger C2H2-type | Domain | |
IPR011146 | HIT-like domain | Domain | |
IPR041388 | PNK, FHA domain | Domain | |
IPR032566 | Aprataxin, C2HE/C2H2/C2HC zinc finger | Domain | |
IPR019808 | Histidine triad, conserved site | Conserved Site | |
IPR008984 | SMAD/FHA domain superfamily | Homologous Superfamily | |
IPR047289 | Aprataxin, forkhead associated domain | Domain | |
IPR036265 | HIT-like superfamily | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q7Z2E3 | :