Annotations: 4N4P

Crystal Structure of N-acetylneuraminate lyase from Mycoplasma synoviae, crystal form I

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d4n4pd_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	automated matches	automated matches	(Mycoplasmopsis synoviae 53 ) [TaxId: 262723 ],	SCOPe (2.08)
C	d4n4pc_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	automated matches	automated matches	(Mycoplasmopsis synoviae 53 ) [TaxId: 262723 ],	SCOPe (2.08)
B	d4n4pb_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	automated matches	automated matches	(Mycoplasmopsis synoviae 53 ) [TaxId: 262723 ],	SCOPe (2.08)
A	d4n4pa_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Aldolase	automated matches	automated matches	(Mycoplasmopsis synoviae 53 ) [TaxId: 262723 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Aldolase	8059157	3000445	SCOP2B (2022-06-29)
C	SCOP2 Family	Class I aldolase	8059156	4003216	SCOP2 (2022-06-29)
C	SCOP2 Superfamily	Aldolase	8059157	3000445	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Aldolase	8059157	3000445	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Aldolase	8059157	3000445	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Pkinase, ABC1	e4n4pD1	A: alpha arrays	X: HTH	H: Toll/Interleukin receptor TIR domain	T: Toll/Interleukin receptor TIR domain	F: Pkinase, ABC1	ECOD (v295.2)
C	Pkinase, ABC1	e4n4pC1	A: alpha arrays	X: HTH	H: Toll/Interleukin receptor TIR domain	T: Toll/Interleukin receptor TIR domain	F: Pkinase, ABC1	ECOD (v295.2)
B	Pkinase, ABC1	e4n4pB1	A: alpha arrays	X: HTH	H: Toll/Interleukin receptor TIR domain	T: Toll/Interleukin receptor TIR domain	F: Pkinase, ABC1	ECOD (v295.2)
A	Pkinase, ABC1	e4n4pA1	A: alpha arrays	X: HTH	H: Toll/Interleukin receptor TIR domain	T: Toll/Interleukin receptor TIR domain	F: Pkinase, ABC1	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
C	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
B	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
A	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00701	Dihydrodipicolinate synthetase family (DHDPS)	Dihydrodipicolinate synthetase family	This family has a TIM barrel structure.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Acylneuraminate lyase	oxo-acid-lyase activity N-acetylneuraminate lyase activity lyase activity catalytic activity carbon-carbon lyase activity	N-acetylneuraminate catabolic process carbohydrate derivative catabolic process catabolic process oxoacid metabolic process carboxylic acid metabolic process carbohydrate derivative metabolic process amino sugar catabolic process carboxylic acid catabolic process amino sugar metabolic process small molecule metabolic process metabolic process cellular process small molecule catabolic process N-acetylneuraminate metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR013785	Aldolase-type TIM barrel	Homologous Superfamily
A, B, C, D	IPR002220	DapA-like	Family