Crystal structure of a putative glycoside hydrolase (BVU_0362) from Bacteroides vulgatus ATCC 8482 at 1.80 A resolution
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | BVU_0362 N-terminal domain-like | 8045823 | 4004709 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | GH5 catalytic domain-like | 8048377 | 4006076 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | BVU_0362 C-terminal domain-like | 8092265 | 4007767 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | E set domains | 8092266 | 3000070 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | (Trans)glycosidases | 8092267 | 3000313 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Glycosyl hydrolase domain-like | 8092268 | 3001528 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | (Trans)glycosidases | 8092267 | 3000313 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | E set domains | 8092266 | 3000070 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Glycosyl hydrolase domain-like | 8092268 | 3001528 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | DUF4038 | e4n0rA1 | A: beta barrels | X: TIM beta/alpha-barrel | H: TIM barrels | T: TIM barrels | F: DUF4038 | ECOD (v294.2) |
| A | RNA_pol_I_A49 | e4n0rA3 | A: beta barrels | X: TIM beta/alpha-barrel | H: TIM barrels | T: TIM barrels | F: RNA_pol_I_A49 | ECOD (v294.2) |
| B | An_peroxidase | e4n0rB1 | A: beta barrels | X: Ribonuclease H-like | H: ARM repeat | T: ARM repeat | F: An_peroxidase | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
| A | 2.60.40.3950 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| B | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
| B | 2.60.40.3950 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR041239 | Domain of unknown function DUF5605 | Domain | |
| IPR032260 | Domain of unknown function DUF5060 | Domain | |
| IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
| IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
| IPR025277 | Apiosidase-like, catalytic domain | Domain |
