4MR0
Crystal structure of PfbA, a surface adhesin of Streptococcus pneumoniae
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Glyco_hydro_28 | e4mr0A1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pectin lyase-like (From Topology) | T: Pectin lyase-like | F: Glyco_hydro_28 | ECOD (1.6) |
B | Glyco_hydro_28 | e4mr0B1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pectin lyase-like (From Topology) | T: Pectin lyase-like | F: Glyco_hydro_28 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.160.20.10 | Mainly Beta | 3 Solenoid | Pectate Lyase C-like | Single-stranded right-handed beta-helix, Pectin lyase-like | CATH (4.3.0) |
B | 2.160.20.10 | Mainly Beta | 3 Solenoid | Pectate Lyase C-like | Single-stranded right-handed beta-helix, Pectin lyase-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13229 | Right handed beta helix region (Beta_helix) | Right handed beta helix region | - | Repeat | |
PF12708 | Pectate lyase superfamily protein (Pectate_lyase_3) | Pectate lyase superfamily protein | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Plasmin and fibronectin-binding protein A | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006626 | Parallel beta-helix repeat | Repeat | |
IPR012334 | Pectin lyase fold | Homologous Superfamily | |
IPR005877 | YSIRK Gram-positive signal peptide | Domain | |
IPR039448 | Right handed beta helix domain | Domain | |
IPR024535 | Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain | Domain | |
IPR051801 | Glycosyl_Hydrolase_28_Enzymes | Family | |
IPR019931 | LPXTG cell wall anchor domain | Domain | |
IPR011050 | Pectin lyase fold/virulence factor | Homologous Superfamily |