Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF22120e4m5eA1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF22120ECOD (1.6)
APF22115e4m5eA2 A: a+b complex topologyX: Lysozyme-like (From Homology)H: Lysozyme-likeT: Lysozyme-likeF: PF22115ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF22115T6SS, Peptidoglycan muramidase Tse3, catalytic domain (T6SS_Tse3_cat)T6SS, Peptidoglycan muramidase Tse3, catalytic domainThis domain is found in Peptidoglycan muramidase Tse3 from Pseudomonas aeruginosa and similar sequences from bacteria. Tse3 is a toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. This protein degrades ...This domain is found in Peptidoglycan muramidase Tse3 from Pseudomonas aeruginosa and similar sequences from bacteria. Tse3 is a toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. This protein degrades peptidoglycan via muramidase activity. It is organised into a small N-terminal domain with a C-terminal catalytic domain (this entry), which contains two major lobes that form an an open, accessible catalytic groove with three calcium-binding ions [1-3].
Domain
PF22120T6SS, Peptidoglycan muramidase Tse3, N-terminal domain (T6SS_Tse3_N)T6SS, Peptidoglycan muramidase Tse3, N-terminal domainThis domain is found in Peptidoglycan muramidase Tse3 from Pseudomonas aeruginosa and similar sequences from bacteria. Tse3 is a toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. This protein degrades ...This domain is found in Peptidoglycan muramidase Tse3 from Pseudomonas aeruginosa and similar sequences from bacteria. Tse3 is a toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. This protein degrades peptidoglycan via muramidase activity. It is organised into a small N-terminal domain (this entry), which contains seven alpha-helices packed in a rod-like helical repeat motif, and a C-terminal catalytic domain (Pfam:PF22115) [1-3].
Domain

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
OPMMuramidase