4LSE
Ion selectivity of OmpF porin soaked in 0.2M NaBr
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d4lseb_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Porins | Porin | Porin | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
A | d4lsea_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Porins | Porin | Porin | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
C | d4lsec_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Porins | Porin | Porin | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF00267 | e4lseB1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: PF00267 | ECOD (1.6) |
A | PF00267 | e4lseA1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: PF00267 | ECOD (1.6) |
C | PF00267 | e4lseC1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: PF00267 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.40.160.10 | Mainly Beta | Beta Barrel | Porin | Porin | CATH (4.3.0) |
A | 2.40.160.10 | Mainly Beta | Beta Barrel | Porin | Porin | CATH (4.3.0) |
C | 2.40.160.10 | Mainly Beta | Beta Barrel | Porin | Porin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00267 | Gram-negative porin (Porin_1) | Gram-negative porin | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050298 | Gram-negative bacterial outer membrane porin | Family | |
IPR001897 | Porin, gammaproteobacterial | Family | |
IPR033900 | Porin domain, Gram-negative type | Domain | |
IPR023614 | Porin domain superfamily | Homologous Superfamily | |
IPR001702 | Porin, Gram-negative type | Family | |
IPR013793 | Porin, Gram-negative type, conserved site | Conserved Site |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |