4LFD
Staphylococcus aureus sortase B-substrate complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Sortase | 8058634 | 4003242 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Sortase | 8058635 | 3000481 | SCOP2 (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Sortase | 8058635 | 3000481 | SCOP2B (2022-06-29) |
E [auth C] | SCOP2B Superfamily | Sortase | 8058635 | 3000481 | SCOP2B (2022-06-29) |
G [auth D] | SCOP2B Superfamily | Sortase | 8058635 | 3000481 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF04203 | e4lfdA1 | A: beta barrels | X: Sortase (From Topology) | H: Sortase (From Topology) | T: Sortase | F: PF04203 | ECOD (1.6) |
C [auth B] | PF04203 | e4lfdB1 | A: beta barrels | X: Sortase (From Topology) | H: Sortase (From Topology) | T: Sortase | F: PF04203 | ECOD (1.6) |
E [auth C] | PF04203 | e4lfdC1 | A: beta barrels | X: Sortase (From Topology) | H: Sortase (From Topology) | T: Sortase | F: PF04203 | ECOD (1.6) |
G [auth D] | PF04203 | e4lfdD1 | A: beta barrels | X: Sortase (From Topology) | H: Sortase (From Topology) | T: Sortase | F: PF04203 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.260.10 | Mainly Beta | Beta Barrel | Sortase | Chain: A | CATH (4.3.0) |
C [auth B] | 2.40.260.10 | Mainly Beta | Beta Barrel | Sortase | Chain: A | CATH (4.3.0) |
E [auth C] | 2.40.260.10 | Mainly Beta | Beta Barrel | Sortase | Chain: A | CATH (4.3.0) |
G [auth D] | 2.40.260.10 | Mainly Beta | Beta Barrel | Sortase | Chain: A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B], E [auth C], G [auth D] | PF04203 | Sortase domain (Sortase) | Sortase domain | The founder member of this family is S. aureus sortase, a transpeptidase that attaches surface proteins by the threonine of an LPXTG motif to the cell wall [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, C [auth B], E [auth C], G [auth D] | Sortase B | - | - | |
B [auth E], D [auth F], F [auth G], H | (CBZ)NPQ(B27) PEPTIDE | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth B], E [auth C], G [auth D] | IPR023365 | Sortase domain superfamily | Homologous Superfamily |
A, C [auth B], E [auth C], G [auth D] | IPR009835 | Sortase B family | Family |
A, C [auth B], E [auth C], G [auth D] | IPR015986 | Sortase B, Firmicutes | Family |
A, C [auth B], E [auth C], G [auth D] | IPR005754 | Sortase family | Family |