4L9M
Autoinhibited state of the Ras-specific exchange factor RasGRP1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | C1 domain | 8018933 | 4003764 | SCOP2 (2022-06-29) |
A | SCOP2 Family | EF-hand modules in multidomain proteins | 8018934 | 4000949 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Ras GEF | 8018935 | 4001268 | SCOP2 (2022-06-29) |
A | SCOP2 Family | REM (Ras exchange motif)-like | 8018966 | 4000381 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Cysteine-rich domain | 8057958 | 3001452 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | EF-hand | 8057957 | 3001983 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ras GEF | 8057956 | 3000128 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | ENTH/VHS domain-like | 8057955 | 3000164 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EF-hand_7_9 | e4l9mA2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_9 | ECOD (1.6) |
A | RasGEF | e4l9mA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ras GEF (From Topology) | T: Ras GEF | F: RasGEF | ECOD (1.6) |
A | C1_1 | e4l9mA3 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: Cysteine-rich domain | F: C1_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.870.10 | Mainly Alpha | Up-down Bundle | Son of sevenless (SoS) protein | Chain S, domain 1 | CATH (4.3.0) |
A | 1.10.840.10 | Mainly Alpha | Orthogonal Bundle | Son of Sevenless (SoS) protein | Chain S, domain 2 | CATH (4.3.0) |
A | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
A | 3.30.60.20 | Alpha Beta | 2-Layer Sandwich | Wheat Germ Agglutinin (Isolectin 2) | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00617 | RasGEF domain (RasGEF) | RasGEF domain | - | Family | |
PF00618 | RasGEF N-terminal motif (RasGEF_N) | RasGEF N-terminal motif | A subset of guanine nucleotide exchange factor for Ras-like small GTPases appear to possess this motif/domain N-terminal to the RasGef (Cdc25-like) domain. | Domain | |
PF00130 | Phorbol esters/diacylglycerol binding domain (C1 domain) (C1_1) | Phorbol esters/diacylglycerol binding domain (C1 domain) | This domain is also known as the Protein kinase C conserved region 1 (C1) domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008937 | Ras-like guanine nucleotide exchange factor | Family | |
IPR020454 | Diacylglycerol/phorbol-ester binding | Domain | |
IPR002048 | EF-hand domain | Domain | |
IPR018247 | EF-Hand 1, calcium-binding site | Binding Site | |
IPR036964 | Ras guanine-nucleotide exchange factor, catalytic domain superfamily | Homologous Superfamily | |
IPR023578 | Ras guanine nucleotide exchange factor domain superfamily | Homologous Superfamily | |
IPR000651 | Ras-like guanine nucleotide exchange factor, N-terminal | Domain | |
IPR001895 | Ras guanine-nucleotide exchange factors catalytic domain | Domain | |
IPR011992 | EF-hand domain pair | Homologous Superfamily | |
IPR002219 | Protein kinase C-like, phorbol ester/diacylglycerol-binding domain | Domain | |
IPR046349 | C1-like domain superfamily | Homologous Superfamily |