4K7G
Crystal structure of a 3-hydroxyproline dehydratse from agrobacterium vitis, target efi-506470, with bound pyrrole 2-carboxylate, ordered active site
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d4k7gb_ | Alpha and beta proteins (a+b) | Diaminopimelate epimerase-like | Diaminopimelate epimerase-like | automated matches | automated matches | (Allorhizobium ampelinum S4 ) [TaxId: 311402 ], | SCOPe (2.08) |
B [auth D] | d4k7gd1 | Alpha and beta proteins (a+b) | Diaminopimelate epimerase-like | Diaminopimelate epimerase-like | automated matches | automated matches | (Allorhizobium ampelinum S4 ) [TaxId: 311402 ], | SCOPe (2.08) |
B [auth D] | d4k7gd2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Allorhizobium ampelinum S4 ) [TaxId: 311402 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | Diaminopimelate epimerase-like | 8087618 | 3000573 | SCOP2B (2022-06-29) |
B [auth D] | SCOP2 Family | Proline racemase | 8087617 | 4002494 | SCOP2 (2022-06-29) |
B [auth D] | SCOP2 Superfamily | Diaminopimelate epimerase-like | 8087618 | 3000573 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | Pro_racemase | e4k7gB1 | A: a+b complex topology | X: Diaminopimelate epimerase-like (From Topology) | H: Diaminopimelate epimerase-like (From Topology) | T: Diaminopimelate epimerase-like | F: Pro_racemase | ECOD (1.6) |
B [auth D] | Pro_racemase | e4k7gD1 | A: a+b complex topology | X: Diaminopimelate epimerase-like (From Topology) | H: Diaminopimelate epimerase-like (From Topology) | T: Diaminopimelate epimerase-like | F: Pro_racemase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 3.10.310.10 | Alpha Beta | Roll | Diaminopimelate Epimerase | Chain A, domain 1 | CATH (4.3.0) |
B [auth D] | 3.10.310.10 | Alpha Beta | Roll | Diaminopimelate Epimerase | Chain A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth D] | PF05544 | Proline racemase (Pro_racemase) | Proline racemase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth B], B [auth D] | 3-hydroxyproline dehydratse |
| - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth D] | IPR008794 | Proline racemase family | Family |