4K2J | pdb_00004k2j

Decameric ring structure of KSHV (HHV-8) latency-associated nuclear antigen (LANA) DNA binding domain

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	LANA1_DNA-bd	e4k2jA1	A: alpha arrays	X: Suppressor of Fused, C-terminal domain	H: HTH	T: winged helix domain	F: LANA1_DNA-bd	ECOD (v295.2)
B	POTRA	e4k2jB1	A: alpha arrays	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: POTRA	ECOD (v295.2)
C	POTRA	e4k2jC1	A: alpha arrays	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: POTRA	ECOD (v295.2)
D	POTRA	e4k2jD1	A: alpha arrays	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: POTRA	ECOD (v295.2)
F	POTRA	e4k2jF1	A: alpha arrays	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: POTRA	ECOD (v295.2)
G	POTRA	e4k2jG1	A: alpha arrays	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: POTRA	ECOD (v295.2)
I	POTRA	e4k2jI1	A: alpha arrays	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: POTRA	ECOD (v295.2)
J	POTRA	e4k2jJ1	A: alpha arrays	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: POTRA	ECOD (v295.2)
H	POTRA	e4k2jH1	A: alpha arrays	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: POTRA	ECOD (v295.2)
E	POTRA	e4k2jE1	A: alpha arrays	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: POTRA	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.70.390	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Epstein Barr virus nuclear antigen-1, DNA-binding domain	CATH (4.3.0)
B	3.30.70.390	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Epstein Barr virus nuclear antigen-1, DNA-binding domain	CATH (4.3.0)
C	3.30.70.390	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Epstein Barr virus nuclear antigen-1, DNA-binding domain	CATH (4.3.0)
D	3.30.70.390	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Epstein Barr virus nuclear antigen-1, DNA-binding domain	CATH (4.3.0)
F	3.30.70.390	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Epstein Barr virus nuclear antigen-1, DNA-binding domain	CATH (4.3.0)
G	3.30.70.390	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Epstein Barr virus nuclear antigen-1, DNA-binding domain	CATH (4.3.0)
I	3.30.70.390	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Epstein Barr virus nuclear antigen-1, DNA-binding domain	CATH (4.3.0)
J	3.30.70.390	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Epstein Barr virus nuclear antigen-1, DNA-binding domain	CATH (4.3.0)
H	3.30.70.390	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Epstein Barr virus nuclear antigen-1, DNA-binding domain	CATH (4.3.0)
E	3.30.70.390	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Epstein Barr virus nuclear antigen-1, DNA-binding domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	KSHV (HHV-8) latency-associated nuclear antigen (LANA)	DNA binding binding nucleic acid binding	-	host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR048523	Protein LANA1-like, DNA-binding domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR037007	Epstein Barr virus nuclear antigen-1, DNA-binding domain superfamily	Homologous Superfamily