4JRR
Crystal structure of disulfide bond oxidoreductase DsbA1 from Legionella pneumophila
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | d4jrrc_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | automated matches | automated matches | (Legionella pneumophila subsp. pneumophila str. Philadelphia 1 ) [TaxId: 272624 ], | SCOPe (2.08) |
A | d4jrra1 | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | automated matches | automated matches | (Legionella pneumophila subsp. pneumophila str. Philadelphia 1 ) [TaxId: 272624 ], | SCOPe (2.08) |
A | d4jrra2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Legionella pneumophila subsp. pneumophila str. Philadelphia 1 ) [TaxId: 272624 ], | SCOPe (2.08) |
B | d4jrrb_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | automated matches | automated matches | (Legionella pneumophila subsp. pneumophila str. Philadelphia 1 ) [TaxId: 272624 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | Thioredoxin-like | 8080064 | 3000031 | SCOP2B (2022-06-29) |
A | SCOP2 Family | DsbA-like | 8080063 | 4000595 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Thioredoxin-like | 8080064 | 3000031 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Thioredoxin-like | 8080064 | 3000031 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | F_UNCLASSIFIED | e4jrrC2 | A: alpha arrays | X: Insertion subdomain in DsbA-like | H: Insertion subdomain in DsbA-like (From Topology) | T: Insertion subdomain in DsbA-like | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e4jrrC3 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
A | F_UNCLASSIFIED | e4jrrA2 | A: alpha arrays | X: Insertion subdomain in DsbA-like | H: Insertion subdomain in DsbA-like (From Topology) | T: Insertion subdomain in DsbA-like | F: F_UNCLASSIFIED | ECOD (1.6) |
A | F_UNCLASSIFIED | e4jrrA3 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e4jrrB2 | A: alpha arrays | X: Insertion subdomain in DsbA-like | H: Insertion subdomain in DsbA-like (From Topology) | T: Insertion subdomain in DsbA-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e4jrrB3 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
A | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
B | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01323 | DSBA-like thioredoxin domain (DSBA) | DSBA-like thioredoxin domain | This family contains a diverse set of proteins with a thioredoxin-like structure Pfam:PF00085. This family also includes 2-hydroxychromene-2-carboxylate (HCCA) isomerase enzymes catalyse one step in prokaryotic polyaromatic hydrocarbon (PAH) cataboli ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Thiol:disulfide interchange protein DsbA | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050824 | Bacterial Thiol:disulfide Interchange Protein DsbA | Family | |
IPR023205 | Thiol:disulphide interchange protein DsbA/DsbL | Family | |
IPR001853 | DSBA-like thioredoxin domain | Domain | |
IPR017937 | Thioredoxin, conserved site | Conserved Site | |
IPR013766 | Thioredoxin domain | Domain | |
IPR036249 | Thioredoxin-like superfamily | Homologous Superfamily |