4J9Y
Calcium-calmodulin complexed with the calmodulin binding domain from a small conductance potassium channel splice variant
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth R] | d4j9yr_ | All alpha proteins | EF Hand-like | EF-hand | Calmodulin-like | Calmodulin | rat (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
A [auth B] | d4j9yb1 | Membrane and cell surface proteins and peptides | Small-conductance potassium channel | Small-conductance potassium channel | Small-conductance potassium channel | Small-conductance potassium channel | rat (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
A [auth B] | d4j9yb3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | rat (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
A [auth B] | d4j9yb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | rat (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth R] | SCOP2B Superfamily | EF-hand | 8032568 | 3001983 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | Calmodulin binding domain (CaMBD)-like | 8038298 | 3002034 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth R] | EF-hand_7_8 | e4j9yR2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
B [auth R] | EF-hand_7_5 | e4j9yR1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
A [auth B] | CaMBD | e4j9yB2 | A: extended segments | X: Small-conductance potassium channel (From Topology) | H: Small-conductance potassium channel (From Topology) | T: Small-conductance potassium channel | F: CaMBD | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 1.10.287.70 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth R] | PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | - | Domain |
A [auth B] | PF02888 | Calmodulin binding domain (CaMBD) | Calmodulin binding domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth R] | IPR002048 | EF-hand domain | Domain |
B [auth R] | IPR018247 | EF-Hand 1, calcium-binding site | Binding Site |
B [auth R] | IPR050145 | Calmodulin and Centrin Calcium-Binding Families | Family |
B [auth R] | IPR011992 | EF-hand domain pair | Homologous Superfamily |
A [auth B] | IPR015449 | Potassium channel, calcium-activated, SK | Family |
A [auth B] | IPR013099 | Potassium channel domain | Domain |
A [auth B] | IPR036122 | SK, calmodulin-binding domain superfamily | Homologous Superfamily |
A [auth B] | IPR004178 | Calmodulin-binding domain | Domain |