4J6K

Crystal structure of calcium2+-free wild-type CD23 lectin domain (crystal form B)


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4j6ka_ Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like C-type lectin domain Low affinity immunoglobulin epsilon Fc receptor human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd4j6kb_ Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like C-type lectin domain Low affinity immunoglobulin epsilon Fc receptor human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd4j6kc_ Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like C-type lectin domain Low affinity immunoglobulin epsilon Fc receptor human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd4j6kd_ Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like C-type lectin domain Low affinity immunoglobulin epsilon Fc receptor human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ed4j6ke_ Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like C-type lectin domain Low affinity immunoglobulin epsilon Fc receptor human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Fd4j6kf_ Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like C-type lectin domain Low affinity immunoglobulin epsilon Fc receptor human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd4j6kg_ Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like C-type lectin domain Low affinity immunoglobulin epsilon Fc receptor human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd4j6kh_ Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like C-type lectin domain Low affinity immunoglobulin epsilon Fc receptor human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyC-type lectin-like 8032471 3001261 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyC-type lectin-like 8032471 3001261 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyC-type lectin-like 8032471 3001261 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyC-type lectin-like 8032471 3001261 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyC-type lectin-like 8032471 3001261 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyC-type lectin-like 8032471 3001261 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyC-type lectin-like 8032471 3001261 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyC-type lectin-like 8032471 3001261 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALectin_Ce4j6kA1 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: C-type lectin-likeF: Lectin_CECOD (1.6)
BLectin_Ce4j6kB1 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: C-type lectin-likeF: Lectin_CECOD (1.6)
CLectin_Ce4j6kC1 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: C-type lectin-likeF: Lectin_CECOD (1.6)
DLectin_Ce4j6kD1 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: C-type lectin-likeF: Lectin_CECOD (1.6)
ELectin_Ce4j6kE1 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: C-type lectin-likeF: Lectin_CECOD (1.6)
FLectin_Ce4j6kF1 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: C-type lectin-likeF: Lectin_CECOD (1.6)
GLectin_Ce4j6kG1 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: C-type lectin-likeF: Lectin_CECOD (1.6)
HLectin_Ce4j6kH1 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: C-type lectin-likeF: Lectin_CECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)
B3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)
C3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)
D3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)
E3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)
F3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)
G3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)
H3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00059Lectin C-type domain (Lectin_C)Lectin C-type domainThis family includes both long and short form C-typeDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Low affinity immunoglobulin epsilon Fc receptor

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR016187C-type lectin foldHomologous Superfamily
A, B, C, D, E
IPR033989CD209-like, C-type lectin-like domainDomain
A, B, C, D, E
IPR001304C-type lectin-likeDomain
A, B, C, D, E
IPR018378C-type lectin, conserved siteConserved Site
A, B, C, D, E
IPR016186C-type lectin-like/link domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR050111C-type lectin and snaclec domain-containing proteinFamily