4J1T
Crystal structure of Thermus thermophilus transhydrogenase heterotrimeric complex of the Alpha1 subunit dimer with the NADP binding domain (domain III) of the Beta subunit in P2(1)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | d4j1tc_ | Alpha and beta proteins (a/b) | DHS-like NAD/FAD-binding domain | DHS-like NAD/FAD-binding domain | Transhydrogenase domain III (dIII) | automated matches | (Thermus thermophilus HB27 ) [TaxId: 262724 ], | SCOPe (2.08) |
F | d4j1tf_ | Alpha and beta proteins (a/b) | DHS-like NAD/FAD-binding domain | DHS-like NAD/FAD-binding domain | Transhydrogenase domain III (dIII) | automated matches | (Thermus thermophilus HB27 ) [TaxId: 262724 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8085303 | 3000044 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8085303 | 3000044 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8085303 | 3000044 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8085303 | 3000044 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | DHS-like NAD/FAD-binding domain | 8076772 | 3001728 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | DHS-like NAD/FAD-binding domain | 8076772 | 3001728 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | AlaDh_PNT_C | e4j1tA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: AlaDh_PNT_C | ECOD (1.6) |
A | AlaDh_PNT_N | e4j1tA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: AlaDh_PNT_N | ECOD (1.6) |
B | AlaDh_PNT_C | e4j1tB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: AlaDh_PNT_C | ECOD (1.6) |
B | AlaDh_PNT_N | e4j1tB2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: AlaDh_PNT_N | ECOD (1.6) |
D | AlaDh_PNT_C | e4j1tD1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: AlaDh_PNT_C | ECOD (1.6) |
D | AlaDh_PNT_N | e4j1tD2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: AlaDh_PNT_N | ECOD (1.6) |
E | AlaDh_PNT_C | e4j1tE1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: AlaDh_PNT_C | ECOD (1.6) |
E | AlaDh_PNT_N | e4j1tE2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: AlaDh_PNT_N | ECOD (1.6) |
C | PNTB_C | e4j1tC1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: PNTB_C | ECOD (1.6) |
F | PNTB_C | e4j1tF1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: PNTB_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
D | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
E | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
C | 3.40.50.1220 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | TPP-binding domain | CATH (4.3.0) |
F | 3.40.50.1220 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | TPP-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05222 | Alanine dehydrogenase/PNT, N-terminal domain (AlaDh_PNT_N) | Alanine dehydrogenase/PNT, N-terminal domain | This family now also contains the lysine 2-oxoglutarate reductases. | Domain | |
PF01262 | Alanine dehydrogenase/PNT, C-terminal domain (AlaDh_PNT_C) | Alanine dehydrogenase/PNT, C-terminal domain | This family now also contains the lysine 2-oxoglutarate reductases. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007886 | Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal | Domain | |
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR008143 | Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 | Conserved Site | |
IPR007698 | Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain | Domain | |
IPR034300 | NADP transhydrogenase beta-like domain | Domain | |
IPR029035 | DHS-like NAD/FAD-binding domain superfamily | Homologous Superfamily | |
IPR012136 | NADP transhydrogenase, beta subunit | Family |