4IT5
Chaperone HscB from Vibrio cholerae
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | HSCB_C | e4it5A6 | A: alpha bundles | X: YvfG-like | H: HSC20 (HSCB), C-terminal oligomerisation domain (From Topology) | T: HSC20 (HSCB), C-terminal oligomerisation domain | F: HSCB_C | ECOD (1.6) |
A | DnaJ | e4it5A5 | A: alpha bundles | X: Chaperone J-domain (From Topology) | H: Chaperone J-domain (From Topology) | T: Chaperone J-domain | F: DnaJ | ECOD (1.6) |
B | HSCB_C | e4it5B4 | A: alpha bundles | X: YvfG-like | H: HSC20 (HSCB), C-terminal oligomerisation domain (From Topology) | T: HSC20 (HSCB), C-terminal oligomerisation domain | F: HSCB_C | ECOD (1.6) |
B | DnaJ | e4it5B3 | A: alpha bundles | X: Chaperone J-domain (From Topology) | H: Chaperone J-domain (From Topology) | T: Chaperone J-domain | F: DnaJ | ECOD (1.6) |
C | HSCB_C | e4it5C6 | A: alpha bundles | X: YvfG-like | H: HSC20 (HSCB), C-terminal oligomerisation domain (From Topology) | T: HSC20 (HSCB), C-terminal oligomerisation domain | F: HSCB_C | ECOD (1.6) |
C | DnaJ | e4it5C5 | A: alpha bundles | X: Chaperone J-domain (From Topology) | H: Chaperone J-domain (From Topology) | T: Chaperone J-domain | F: DnaJ | ECOD (1.6) |
D | HSCB_C | e4it5D6 | A: alpha bundles | X: YvfG-like | H: HSC20 (HSCB), C-terminal oligomerisation domain (From Topology) | T: HSC20 (HSCB), C-terminal oligomerisation domain | F: HSCB_C | ECOD (1.6) |
D | DnaJ | e4it5D5 | A: alpha bundles | X: Chaperone J-domain (From Topology) | H: Chaperone J-domain (From Topology) | T: Chaperone J-domain | F: DnaJ | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.287.110 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | DnaJ domain | CATH (4.3.0) |
A | 1.20.1280.20 | Mainly Alpha | Up-down Bundle | Monooxygenase | HscB, C-terminal domain | CATH (4.3.0) |
B | 1.10.287.110 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | DnaJ domain | CATH (4.3.0) |
B | 1.20.1280.20 | Mainly Alpha | Up-down Bundle | Monooxygenase | HscB, C-terminal domain | CATH (4.3.0) |
C | 1.10.287.110 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | DnaJ domain | CATH (4.3.0) |
C | 1.20.1280.20 | Mainly Alpha | Up-down Bundle | Monooxygenase | HscB, C-terminal domain | CATH (4.3.0) |
D | 1.10.287.110 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | DnaJ domain | CATH (4.3.0) |
D | 1.20.1280.20 | Mainly Alpha | Up-down Bundle | Monooxygenase | HscB, C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00226 | DnaJ domain (DnaJ) | DnaJ domain | DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are conf ... | Domain | |
PF07743 | HSCB C-terminal oligomerisation domain (HSCB_C) | HSCB C-terminal oligomerisation domain | This domain is the HSCB C-terminal oligomerisation domain and is found on co-chaperone proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001623 | DnaJ domain | Domain | |
IPR004640 | Co-chaperone Hsc20 | Family | |
IPR036386 | HscB, C-terminal domain superfamily | Homologous Superfamily | |
IPR009073 | Co-chaperone HscB, C-terminal oligomerisation domain | Domain | |
IPR036869 | Chaperone J-domain superfamily | Homologous Superfamily |