4IRL
X-ray structure of the CARD domain of zebrafish GBP-NLRP1 like protein
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058187 | 3000083 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058187 | 3000083 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058187 | 3000083 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00619 | e4irlA1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PF00619 | ECOD (1.6) |
A | PF01547 | e4irlA2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: PF01547 | ECOD (1.6) |
B | PF00619 | e4irlB1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PF00619 | ECOD (1.6) |
B | PF01547 | e4irlB3 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: PF01547 | ECOD (1.6) |
C | PF00619 | e4irlC1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PF00619 | ECOD (1.6) |
C | PF01547 | e4irlC2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: PF01547 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.533.10 | Mainly Alpha | Orthogonal Bundle | Death Domain, Fas | Death Domain, Fas | CATH (utative) |
B | 1.10.533.10 | Mainly Alpha | Orthogonal Bundle | Death Domain, Fas | Death Domain, Fas | CATH (utative) |
C | 1.10.533.10 | Mainly Alpha | Orthogonal Bundle | Death Domain, Fas | Death Domain, Fas | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01547 | Bacterial extracellular solute-binding protein (SBP_bac_1) | Bacterial extracellular solute-binding protein | - | Family | |
PF00619 | Caspase recruitment domain (CARD) | Caspase recruitment domain | Motif contained in proteins involved in apoptotic signaling. Predicted to possess a DEATH (Pfam:PF00531) domain-like fold . | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006061 | Solute-binding family 1, conserved site | Conserved Site | |
IPR006060 | Maltose/Cyclodextrin ABC transporter, substrate-binding protein | Family | |
IPR006059 | Bacterial-type extracellular solute-binding protein | Family | |
IPR011029 | Death-like domain superfamily | Homologous Superfamily | |
IPR036543 | Guanylate-binding protein, C-terminal domain superfamily | Homologous Superfamily | |
IPR033516 | CARD8/ASC/NALP1, CARD domain | Domain | |
IPR030386 | GB1/RHD3-type guanine nucleotide-binding (G) domain | Domain | |
IPR001315 | CARD domain | Domain | |
IPR037684 | Guanylate-binding protein, C-terminal | Domain | |
IPR015894 | Guanylate-binding protein, N-terminal | Domain | |
IPR025307 | FIIND domain | Domain | |
IPR003191 | Guanylate-binding protein/Atlastin, C-terminal | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |