4ILL
Recognition and Cleavage of a non-structured CRISPR RNA by its Processing Endoribonuclease Cas6
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | CRISPR-associated proteins | 8052198 | 3001554 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | CRISPR-associated proteins | 8052199 | 3001554 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | CRISPR-associated proteins | 8052199 | 3001554 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | CRISPR-associated proteins | 8052198 | 3001554 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | CRISPR_Cas6 | e4illA2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: CRISPR_Cas6 | ECOD (1.6) |
A | EUF08362 | e4illA1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: EUF08362 | ECOD (1.6) |
C [auth B] | CRISPR_Cas6 | e4illB2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: CRISPR_Cas6 | ECOD (1.6) |
C [auth B] | EUF08362 | e4illB1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: EUF08362 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.1900 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
C [auth B] | 2.40.30.310 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
C [auth B] | 3.30.70.1900 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B] | PF17952 | Cas6 N-terminal domain (Cas6_N) | Cas6 N-terminal domain | The CRISPR-Cas system is a prokaryotic defense mechanism against foreign genetic elements. The key elements of this defense system are the Cas proteins and the CRISPR RNA.Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family ... | Domain |
A, C [auth B] | PF10040 | CRISPR-associated endoribonuclease Cas6 (CRISPR_Cas6) | CRISPR-associated endoribonuclease Cas6 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, C [auth B] | CRISPR-associated endoribonuclease Cas6 2 |
| - | |
B [auth R], D [auth C] | RNA (5'-R(*GP*CP*UP*AP*AP*UP*CP*UP*AP*CP*UP*AP*UP*AP*GP*AP*AP*UP*UP*GP*AP*AP*AP*G)-3') | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth B] | IPR041165 | Cas6, N-terminal domain, archaea | Domain |
A, C [auth B] | IPR019267 | CRISPR-associated protein Cas6, C-terminal | Domain |
A, C [auth B] | IPR010156 | CRISPR-associated endoribonuclease Cas6 | Family |