4IHS
Crystal Structure of BenM_DBD/catB site 1 DNA Complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00126 | e4ihsA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00126 | ECOD (1.6) |
B | PF00126 | e4ihsB1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00126 | ECOD (1.6) |
C | PF00126 | e4ihsC1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00126 | ECOD (1.6) |
D | PF00126 | e4ihsD1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00126 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
B | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
C | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
D | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
HTH-type transcriptional regulator BenM | - | |||
catB site 1 DNA | - | - | - | |
catB site 1 DNA - complement | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005119 | LysR, substrate-binding | Domain | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR000847 | Transcription regulator HTH, LysR | Domain |