4IDP
human atlastin-1 1-446, N440T, GppNHp
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | GBP helical domain-like | 8019678 | 3001145 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ras-like P-loop GTPases | 8019680 | 3002022 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Ras-like P-loop GTPases | 8019680 | 3002022 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | GBP helical domain-like | 8019678 | 3001145 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ras-like P-loop GTPases | 8019680 | 3002022 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | GBP helical domain-like | 8019678 | 3001145 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Ras-like P-loop GTPases | 8019680 | 3002022 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | GBP helical domain-like | 8019678 | 3001145 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | KOG2037 | e4idpB1 | A: alpha bundles | X: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain (From Topology) | H: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain (From Topology) | T: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | F: KOG2037 | ECOD (1.6) |
B | MCM_AAA | e4idpB3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
A | KOG2037 | e4idpA2 | A: alpha bundles | X: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain (From Topology) | H: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain (From Topology) | T: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | F: KOG2037 | ECOD (1.6) |
A | MCM_AAA | e4idpA3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
C | KOG2037 | e4idpC1 | A: alpha bundles | X: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain (From Topology) | H: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain (From Topology) | T: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | F: KOG2037 | ECOD (1.6) |
C | MCM_AAA | e4idpC3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
D | KOG2037 | e4idpD2 | A: alpha bundles | X: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain (From Topology) | H: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain (From Topology) | T: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | F: KOG2037 | ECOD (1.6) |
D | MCM_AAA | e4idpD3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
B | 1.20.58.420 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
A | 1.20.58.420 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
C | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
C | 1.20.58.420 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
D | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
D | 1.20.58.420 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02263 | Guanylate-binding protein, N-terminal domain (GBP) | Guanylate-binding protein, N-terminal domain | Transcription of the anti-viral guanylate-binding protein (GBP) is induced by interferon-gamma during macrophage induction. This family contains GBP1 and GPB2, both GTPases capable of binding GTP, GDP and GMP. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036543 | Guanylate-binding protein, C-terminal domain superfamily | Homologous Superfamily | |
IPR030386 | GB1/RHD3-type guanine nucleotide-binding (G) domain | Domain | |
IPR015894 | Guanylate-binding protein, N-terminal | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |