4HKH
Structure of the Hcp1 protein from E. coli EAEC 042 pathovar, mutants N93W-S158W
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF05638 | e4hkhA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05638 | ECOD (1.6) |
B | PF05638 | e4hkhB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05638 | ECOD (1.6) |
C [auth D] | PF05638 | e4hkhD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05638 | ECOD (1.6) |
D [auth E] | PF05638 | e4hkhE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05638 | ECOD (1.6) |
E [auth F] | PF05638 | e4hkhF1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05638 | ECOD (1.6) |
F [auth G] | PF05638 | e4hkhG1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05638 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.110.20 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
B | 2.30.110.20 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
C [auth D] | 2.30.110.20 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
D [auth E] | 2.30.110.20 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
E [auth F] | 2.30.110.20 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
F [auth G] | 2.30.110.20 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05638 | Type VI secretion system effector, Hcp (T6SS_HCP) | Type VI secretion system effector, Hcp | HCP is a family of proteins which are expressed in up to 1000 copies in Gram-negative bacteria. Together these copies aggregate into a needle-like shaft or tube that will penetrate other bacteria via a puncturing protein attached to its head [1]. In ... | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036624 | Hcp1-like superfamily | Homologous Superfamily | |
IPR052947 | Type VI secretion system Hcp1 domain-containing protein | Family | |
IPR008514 | Type VI secretion system effector Hcp | Family |