4H19 | pdb_00004h19

Crystal structure of an enolase (mandelate racemase subgroup, target EFI-502087) from agrobacterium tumefaciens, with bound Mg and d-ribonohydroxamate, ordered loop

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AMR_MLE_Ne4h19A3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
AMR_MLE_C_1e4h19A4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
BMR_MLE_Ne4h19B3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
BMR_MLE_C_1e4h19B4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
CMR_MLE_Ne4h19C3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
CMR_MLE_C_1e4h19C4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
DMR_MLE_Ne4h19D3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
DMR_MLE_C_1e4h19D4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
EMR_MLE_Ne4h19E3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
EMR_MLE_C_1e4h19E4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
FMR_MLE_Ne4h19F3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
FMR_MLE_C_1e4h19F4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
GMR_MLE_Ne4h19G3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
GMR_MLE_C_1e4h19G4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
HMR_MLE_Ne4h19H3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
HMR_MLE_C_1e4h19H4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
IMR_MLE_Ne4h19I3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
IMR_MLE_C_1e4h19I4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
J [auth K]MR_MLE_Ne4h19K3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
J [auth K]MR_MLE_C_1e4h19K4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
K [auth L]MR_MLE_Ne4h19L3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
K [auth L]MR_MLE_C_1e4h19L4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
L [auth M]MR_MLE_Ne4h19M3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
L [auth M]MR_MLE_C_1e4h19M4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
M [auth N]MR_MLE_Ne4h19N3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
M [auth N]MR_MLE_C_1e4h19N4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
N [auth P]MR_MLE_Ne4h19P3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
N [auth P]MR_MLE_C_1e4h19P4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
O [auth J]MR_MLE_Ne4h19J3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
O [auth J]MR_MLE_C_1e4h19J4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)
P [auth O]MR_MLE_Ne4h19O3 A: a+b two layersX: Enolase-N/ribosomal proteinH: Enolase N-terminal domain-like (From Topology)T: Enolase N-terminal domain-likeF: MR_MLE_NECOD (1.6)
P [auth O]MR_MLE_C_1e4h19O4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: MR_MLE_C_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
A3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
B3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
B3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
C3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
C3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
D3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
D3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
E3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
E3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
F3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
F3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
G3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
G3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
H3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
H3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
I3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
I3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
J [auth K]3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
J [auth K]3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
K [auth L]3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
K [auth L]3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
L [auth M]3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
L [auth M]3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
M [auth N]3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
M [auth N]3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
N [auth P]3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
N [auth P]3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
O [auth J]3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
O [auth J]3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
P [auth O]3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
P [auth O]3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B,
C,
D,
E,
PF02746Mandelate racemase / muconate lactonizing enzyme, N-terminal domain (MR_MLE_N)Mandelate racemase / muconate lactonizing enzyme, N-terminal domainSCOP reports fold similarity with enolase N-terminal domain. Domain
A,
B,
C,
D,
E,
PF13378Enolase C-terminal domain-like (MR_MLE_C)Enolase C-terminal domain-likeThis domain appears at the C-terminus of many of the proteins that carry the MR_MLE_N Pfam:PF02746 domain. EC:4.2.1.40. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B,
C,
D,
E,
Mandelate racemase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B,
C,
D,
E,
IPR029065Enolase C-terminal domain-likeDomain
A,
B,
C,
D,
E,
IPR013341Mandelate racemase/muconate lactonizing enzyme, N-terminal domainDomain
A,
B,
C,
D,
E,
IPR046945L-rhamnonate dehydratase-likeFamily
A,
B,
C,
D,
E,
IPR013342Mandelate racemase/muconate lactonizing enzyme, C-terminalDomain
A,
B,
C,
D,
E,
IPR029017Enolase-like, N-terminalHomologous Superfamily
A,
B,
C,
D,
E,
IPR036849Enolase-like, C-terminal domain superfamilyHomologous Superfamily