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 4GKL | pdb_00004gkl

Crystal structure of a noncanonic maltogenic alpha-amylase AmyB from Thermotoga neapolitana

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BFtsJe4gklB2 A: alpha arraysX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: FtsJECOD (v295.2)
BRPA43_OBe4gklB3 A: alpha arraysX: DEATH domainH: PH domain-likeT: PH domain-likeF: RPA43_OBECOD (v295.2)
AAlpha-amylasee4gklA1 A: alpha arraysX: Alpha-beta plaitsH: Family B DNA polymerase insertion domainT: Family B DNA polymerase insertion domainF: Alpha-amylaseECOD (v295.2)
APorphobil_deamCe4gklA2 A: alpha arraysX: Alpha-beta plaitsH: Family B DNA polymerase insertion domainT: Family B DNA polymerase insertion domainF: Porphobil_deamCECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
B2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Alpha-amylase- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR006047Glycosyl hydrolase family 13, catalytic domainDomain
A, B
IPR017853Glycoside hydrolase superfamilyHomologous Superfamily
A, B
IPR013780Glycosyl hydrolase, all-betaHomologous Superfamily
A, B
IPR055067Alpha-amylase-like, C-terminalDomain