4GFB
Rap1/DNA complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Rap1-DNA-bind | e4gfbA3 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Rap1-DNA-bind | ECOD (1.6) |
A | Myb_DNA-binding_1 | e4gfbA1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Myb_DNA-binding_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00249 | Myb-like DNA-binding domain (Myb_DNA-binding) | Myb-like DNA-binding domain | This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1]. | Domain | |
PF09197 | Rap1, DNA-binding (Rap1-DNA-bind) | Rap1, DNA-binding | Members of this family, which are predominantly found in the yeast protein rap1, assume a secondary structure consisting of a three-helix bundle and an N-terminal arm. They contain an Arg-Asp-Arg-Lys sequence that interacts with an ACACC region in th ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038104 | TRF2-interacting telomeric protein/Rap1, C-terminal domain superfamily | Homologous Superfamily | |
IPR017930 | Myb domain | Domain | |
IPR001357 | BRCT domain | Domain | |
IPR015280 | Rap1, DNA-binding domain | Domain | |
IPR036420 | BRCT domain superfamily | Homologous Superfamily | |
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR039595 | TE2IP/Rap1 | Family | |
IPR021661 | TRF2-interacting telomeric protein/Rap1, C-terminal | Domain | |
IPR001005 | SANT/Myb domain | Domain |