Crystal structure of the metallo-beta-lactamase VIM-31 in its oxidized form at 1.88 A


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyMetallo-hydrolase/oxidoreductase 8061859 3001057 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyMetallo-hydrolase/oxidoreductase 8061859 3001057 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPEPCK_Ne4fsbB1 A: beta barrelsX: PBZ domainH: PBZ domainT: PBZ domainF: PEPCK_NECOD (v294.2)
APEPCK_Ne4fsbA1 A: beta barrelsX: PBZ domainH: PBZ domainT: PBZ domainF: PEPCK_NECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.60.15.10 Alpha Beta 4-Layer Sandwich Metallo-beta-lactamase Chain ACATH (4.3.0)
A3.60.15.10 Alpha Beta 4-Layer Sandwich Metallo-beta-lactamase Chain ACATH (4.3.0)

AMR Gene: CARD Annotation CARD Database Homepage

ChainsAccessionShort NameDescriptionProvenance Source (Version)
A, B
ARO:3002301VIM-31VIM-31 is a beta-lactamase found in Enterobacter cloacae.CARD (4.0.1)

AMR Gene Family: CARD Annotation CARD Database Homepage

ChainsAccessionGene FamilyDrug Class Resistance MachanismProvenance Source (Version)
A, B
ARO:3000021VIM beta-lactamasecarbapenem, cephalosporin, penicillin beta-lactamantibiotic inactivationCARD (4.0.1)

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
OCS Parent Component: CYS

AA0556

:  L-cysteic acid (L-cysteine sulfonic acid) MOD:00460