Annotations: 4FDY

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	YonK	e4fdyB2	A: alpha arrays	X: DP domain	H: DP domain	T: DP domain	F: YonK	ECOD (v295.2)
B	ABC_tran	e4fdyB3	A: alpha arrays	X: Thioredoxin-like	H: Thioredoxin-like	T: Thioredoxin-like	F: ABC_tran	ECOD (v295.2)
A	NLPC_P60	e4fdyA3	A: alpha arrays	X: Fusion glycoprotein F2	H: Fusion glycoprotein F2	T: Fusion glycoprotein F2	F: NLPC_P60	ECOD (v295.2)
A	AMA-1	e4fdyA4	A: alpha arrays	X: Fusion glycoprotein F2	H: Fusion glycoprotein F2	T: Fusion glycoprotein F2	F: AMA-1	ECOD (v295.2)

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.10.530.10	Mainly Alpha	Orthogonal Bundle	Lysozyme		CATH (4.3.0)
B	3.90.1720.10	Alpha Beta	Alpha-Beta Complex	endopeptidase fold (from Nostoc punctiforme)	endopeptidase domain like (from Nostoc punctiforme)	CATH (4.3.0)
A	1.10.530.10	Mainly Alpha	Orthogonal Bundle	Lysozyme		CATH (4.3.0)
A	3.90.1720.10	Alpha Beta	Alpha-Beta Complex	endopeptidase fold (from Nostoc punctiforme)	endopeptidase domain like (from Nostoc punctiforme)	CATH (4.3.0)

Chains	Accession	Name	Type
A, B	IPR000064	Endopeptidase, NLPC/P60 domain	Domain
A, B	IPR038765	Papain-like cysteine peptidase superfamily	Homologous Superfamily
A, B	IPR047194	CwlT-like, lysozyme domain	Domain
A, B	IPR051202	Peptidase C40	Family
A, B	IPR023346	Lysozyme-like domain superfamily	Homologous Superfamily

Modified Residue(s)
Chain	Residue(s)	Description
A, B	MSE	Parent Component: MET
A, B	OCS	Parent Component: CYS : AA0556 : L-cysteic acid (L-cysteine sulfonic acid) MOD:00460

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

4FDY | pdb_00004fdy