4FBC
Structure of mutant RIP from barley seeds in complex with AMP
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00161 | e4fbcA2 | A: a+b two layers | X: RIP/Polo-box domain | H: Ribosome inactivating proteins (RIP) (From Topology) | T: Ribosome inactivating proteins (RIP) | F: PF00161 | ECOD (1.6) |
D | PF00161 | e4fbcD2 | A: a+b two layers | X: RIP/Polo-box domain | H: Ribosome inactivating proteins (RIP) (From Topology) | T: Ribosome inactivating proteins (RIP) | F: PF00161 | ECOD (1.6) |
B | PF00161 | e4fbcB2 | A: a+b two layers | X: RIP/Polo-box domain | H: Ribosome inactivating proteins (RIP) (From Topology) | T: Ribosome inactivating proteins (RIP) | F: PF00161 | ECOD (1.6) |
C | PF00161 | e4fbcC2 | A: a+b two layers | X: RIP/Polo-box domain | H: Ribosome inactivating proteins (RIP) (From Topology) | T: Ribosome inactivating proteins (RIP) | F: PF00161 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.420.10 | Alpha Beta | 3-Layer(aba) Sandwich | Ricin (A subunit) | domain 1 | CATH (4.3.0) |
A | 4.10.470.10 | Few Secondary Structures | Irregular | Ricin (A Subunit), domain 2 | Ricin (A Subunit), domain 2 | CATH (4.3.0) |
D | 3.40.420.10 | Alpha Beta | 3-Layer(aba) Sandwich | Ricin (A subunit) | domain 1 | CATH (4.3.0) |
D | 4.10.470.10 | Few Secondary Structures | Irregular | Ricin (A Subunit), domain 2 | Ricin (A Subunit), domain 2 | CATH (4.3.0) |
B | 3.40.420.10 | Alpha Beta | 3-Layer(aba) Sandwich | Ricin (A subunit) | domain 1 | CATH (4.3.0) |
B | 4.10.470.10 | Few Secondary Structures | Irregular | Ricin (A Subunit), domain 2 | Ricin (A Subunit), domain 2 | CATH (4.3.0) |
C | 3.40.420.10 | Alpha Beta | 3-Layer(aba) Sandwich | Ricin (A subunit) | domain 1 | CATH (4.3.0) |
C | 4.10.470.10 | Few Secondary Structures | Irregular | Ricin (A Subunit), domain 2 | Ricin (A Subunit), domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036041 | Ribosome-inactivating protein superfamily | Homologous Superfamily | |
IPR017988 | Ribosome-inactivating protein conserved site | Conserved Site | |
IPR016139 | Ribosome-inactivating protein, subdomain 2 | Homologous Superfamily | |
IPR017989 | Ribosome-inactivating protein type 1/2 | Family | |
IPR016138 | Ribosome-inactivating protein, subdomain 1 | Homologous Superfamily | |
IPR001574 | Ribosome-inactivating protein | Family |