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 4EDO | pdb_00004edo

Crystal structure of far-red fluorescent protein eqFP650

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd4edob_ Alpha and beta proteins (a+b) GFP-like GFP-like Fluorescent proteins automated matches (Entacmaea quadricolor ) [TaxId: 6118 ], SCOPe (2.08)
Ad4edoa_ Alpha and beta proteins (a+b) GFP-like GFP-like Fluorescent proteins automated matches (Entacmaea quadricolor ) [TaxId: 6118 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyGFP-like 8083494 3000576 SCOP2B (2022-06-29)
ASCOP2 FamilyFluorescent proteins 8083493 4001049 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyGFP-like 8083494 3000576 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B14-3-3e4edoB1 A: alpha arraysX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: 14-3-3ECOD (v295.2)
APDEase_Ie4edoA1 A: alpha arraysX: Flavodoxin-likeH: Precorrin-8X methylmutase CbiC/CobHT: Precorrin-8X methylmutase CbiC/CobHF: PDEase_IECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)
A2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
far-red fluorescent protein eqFP650- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR011584Green fluorescent protein-relatedFamily
A, B
IPR009017Green fluorescent proteinHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
NRQ Parent Component: MET, TYR, GLY

:  AA0379

:  2-imino-methionine 5-imidazolinone glycine MOD:00384