4DS0
Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4ds0a1 | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | automated matches | automated matches | (Rotavirus sp. ) [TaxId: 10970 ], | SCOPe (2.08) |
A | d4ds0a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Rotavirus sp. ) [TaxId: 10970 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00426 | Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain (VP4_haemagglut) | Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain | This entry represents the N-terminal concanavalin-like domain from the VP4 protein of rotavirus. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000416 | Haemagglutinin outer capsid protein VP4, concanavalin-like domain | Domain | |
IPR035330 | Rotavirus VP4, membrane interaction domain | Domain | |
IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily | |
IPR035329 | Rotavirus VP4 helical domain | Domain | |
IPR042546 | Outer capsid protein VP4 | Family | |
IPR038017 | Rotavirus VP4, membrane interaction domain superfamily | Homologous Superfamily |