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 4DQX | pdb_00004dqx

Crystal structure of a short chain dehydrogenase from Rhizobium etli CFN 42

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd4dqxd1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Rhizobium etli CFN 42 ) [TaxId: 347834 ], SCOPe (2.08)
Dd4dqxd2 Artifacts Tags Tags Tags N-terminal Tags (Rhizobium etli CFN 42 ) [TaxId: 347834 ], SCOPe (2.08)
Cd4dqxc1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Rhizobium etli CFN 42 ) [TaxId: 347834 ], SCOPe (2.08)
Cd4dqxc2 Artifacts Tags Tags Tags N-terminal Tags (Rhizobium etli CFN 42 ) [TaxId: 347834 ], SCOPe (2.08)
Bd4dqxb_ Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Rhizobium etli CFN 42 ) [TaxId: 347834 ], SCOPe (2.08)
Ad4dqxa1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Rhizobium etli CFN 42 ) [TaxId: 347834 ], SCOPe (2.08)
Ad4dqxa2 Artifacts Tags Tags Tags N-terminal Tags (Rhizobium etli CFN 42 ) [TaxId: 347834 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilySDR-like 8066866 3000038 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySDR-like 8066866 3000038 SCOP2B (2022-06-29)
BSCOP2 FamilyShort-chain dehydrogenases/reductases, SDR 8066865 4000029 SCOP2 (2022-06-29)
BSCOP2 SuperfamilySDR-like 8066866 3000038 SCOP2 (2022-06-29)
ASCOP2B SuperfamilySDR-like 8066866 3000038 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DAnk_2, Ank_4, Ank_5e4dqxD2 A: alpha arraysX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: Ank_2, Ank_4, Ank_5ECOD (v295.2)
CAnk_2, Ank_4, Ank_5e4dqxC2 A: alpha arraysX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: Ank_2, Ank_4, Ank_5ECOD (v295.2)
BAnk_2, Ank_4, Ank_5e4dqxB2 A: alpha arraysX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: Ank_2, Ank_4, Ank_5ECOD (v295.2)
APeptidase_M23e4dqxA1 A: alpha arraysX: Alpha-beta plaitsH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_M23ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
C3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
B3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
A3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF13561Enoyl-(Acyl carrier protein) reductase (adh_short_C2)Enoyl-(Acyl carrier protein) reductaseThis domain is found in Enoyl-(Acyl carrier protein) reductases. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
A, B, C, D
IPR002347Short-chain dehydrogenase/reductase SDRFamily
A, B, C, D
IPR020904Short-chain dehydrogenase/reductase, conserved siteConserved Site