4DJZ
Catalytic fragment of masp-1 in complex with its specific inhibitor developed by directed evolution on sgci scaffold
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E [auth H] | SCOP2B Superfamily | PMP inhibitors | 8038212 | 3000534 | SCOP2B (2022-06-29) |
F [auth I] | SCOP2B Superfamily | PMP inhibitors | 8038212 | 3000534 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Sushi | e4djzA2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi | ECOD (1.6) |
A | Sushi_3 | e4djzA1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi_3 | ECOD (1.6) |
C | Sushi | e4djzC4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi | ECOD (1.6) |
C | Sushi_3 | e4djzC3 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi_3 | ECOD (1.6) |
B | Trypsin_1 | e4djzB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
D | Trypsin_1 | e4djzD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
E [auth H] | Pacifastin_I | e4djzH1 | A: few secondary structure elements | X: PMP inhibitors (From Topology) | H: PMP inhibitors (From Topology) | T: PMP inhibitors | F: Pacifastin_I | ECOD (1.6) |
F [auth I] | Pacifastin_I | e4djzI1 | A: few secondary structure elements | X: PMP inhibitors (From Topology) | H: PMP inhibitors (From Topology) | T: PMP inhibitors | F: Pacifastin_I | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.10.70.10 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
C | 2.10.70.10 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
B | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
D | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00084 | Sushi repeat (SCR repeat) (Sushi) | Sushi repeat (SCR repeat) | - | Domain | |
PF00089 | Trypsin (Trypsin) | Trypsin | - | Domain | |
E [auth H], F [auth I] | PF05375 | Pacifastin inhibitor (LCMII) (Pacifastin_I) | Pacifastin inhibitor (LCMII) | - | Family |