4D8J
Structure of E. coli MatP-mats complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | MatP, N-terminal domain-like | 8106457 | 3002857 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | Ribbon-helix-helix | 8106456 | 3000295 | SCOP2B (2022-06-29) |
D [auth A] | SCOP2 Family | Ter-specific factor MatP, C-terminal domain-like | 8046945 | 4005381 | SCOP2 (2022-06-29) |
D [auth A] | SCOP2 Family | MatP, N-terminal domain-like | 8048010 | 4005913 | SCOP2 (2022-06-29) |
D [auth A] | SCOP2 Superfamily | Ribbon-helix-helix | 8106456 | 3000295 | SCOP2 (2022-06-29) |
D [auth A] | SCOP2 Superfamily | MatP, N-terminal domain-like | 8106457 | 3002857 | SCOP2 (2022-06-29) |
E [auth D] | SCOP2B Superfamily | Ribbon-helix-helix | 8106456 | 3000295 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | MatP, N-terminal domain-like | 8106457 | 3002857 | SCOP2B (2022-06-29) |
H [auth C] | SCOP2B Superfamily | MatP, N-terminal domain-like | 8106457 | 3002857 | SCOP2B (2022-06-29) |
H [auth C] | SCOP2B Superfamily | Ribbon-helix-helix | 8106456 | 3000295 | SCOP2B (2022-06-29) |
I [auth H] | SCOP2B Superfamily | MatP, N-terminal domain-like | 8106457 | 3002857 | SCOP2B (2022-06-29) |
I [auth H] | SCOP2B Superfamily | Ribbon-helix-helix | 8106456 | 3000295 | SCOP2B (2022-06-29) |
L [auth G] | SCOP2B Superfamily | MatP, N-terminal domain-like | 8106457 | 3002857 | SCOP2B (2022-06-29) |
L [auth G] | SCOP2B Superfamily | Ribbon-helix-helix | 8106456 | 3000295 | SCOP2B (2022-06-29) |
M [auth L] | SCOP2B Superfamily | Ribbon-helix-helix | 8106456 | 3000295 | SCOP2B (2022-06-29) |
M [auth L] | SCOP2B Superfamily | MatP, N-terminal domain-like | 8106457 | 3002857 | SCOP2B (2022-06-29) |
P [auth K] | SCOP2B Superfamily | MatP, N-terminal domain-like | 8106457 | 3002857 | SCOP2B (2022-06-29) |
P [auth K] | SCOP2B Superfamily | Ribbon-helix-helix | 8106456 | 3000295 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | MatP_C | e4d8jB1 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: MatP_C | ECOD (1.6) |
A [auth B] | MatP | e4d8jB2 | A: alpha arrays | X: Macrodomain Ter protein MatP (From Topology) | H: Macrodomain Ter protein MatP (From Topology) | T: Macrodomain Ter protein MatP | F: MatP | ECOD (1.6) |
D [auth A] | MatP_C | e4d8jA1 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: MatP_C | ECOD (1.6) |
D [auth A] | MatP | e4d8jA2 | A: alpha arrays | X: Macrodomain Ter protein MatP (From Topology) | H: Macrodomain Ter protein MatP (From Topology) | T: Macrodomain Ter protein MatP | F: MatP | ECOD (1.6) |
E [auth D] | MatP_C | e4d8jD1 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: MatP_C | ECOD (1.6) |
E [auth D] | MatP | e4d8jD2 | A: alpha arrays | X: Macrodomain Ter protein MatP (From Topology) | H: Macrodomain Ter protein MatP (From Topology) | T: Macrodomain Ter protein MatP | F: MatP | ECOD (1.6) |
H [auth C] | MatP_C | e4d8jC1 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: MatP_C | ECOD (1.6) |
H [auth C] | MatP | e4d8jC2 | A: alpha arrays | X: Macrodomain Ter protein MatP (From Topology) | H: Macrodomain Ter protein MatP (From Topology) | T: Macrodomain Ter protein MatP | F: MatP | ECOD (1.6) |
I [auth H] | MatP_C | e4d8jH1 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: MatP_C | ECOD (1.6) |
I [auth H] | MatP | e4d8jH2 | A: alpha arrays | X: Macrodomain Ter protein MatP (From Topology) | H: Macrodomain Ter protein MatP (From Topology) | T: Macrodomain Ter protein MatP | F: MatP | ECOD (1.6) |
L [auth G] | MatP_C | e4d8jG1 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: MatP_C | ECOD (1.6) |
L [auth G] | MatP | e4d8jG2 | A: alpha arrays | X: Macrodomain Ter protein MatP (From Topology) | H: Macrodomain Ter protein MatP (From Topology) | T: Macrodomain Ter protein MatP | F: MatP | ECOD (1.6) |
M [auth L] | MatP_C | e4d8jL1 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: MatP_C | ECOD (1.6) |
M [auth L] | MatP | e4d8jL2 | A: alpha arrays | X: Macrodomain Ter protein MatP (From Topology) | H: Macrodomain Ter protein MatP (From Topology) | T: Macrodomain Ter protein MatP | F: MatP | ECOD (1.6) |
P [auth K] | MatP_C | e4d8jK1 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: MatP_C | ECOD (1.6) |
P [auth K] | MatP | e4d8jK2 | A: alpha arrays | X: Macrodomain Ter protein MatP (From Topology) | H: Macrodomain Ter protein MatP (From Topology) | T: Macrodomain Ter protein MatP | F: MatP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17414 | MatP C-terminal ribbon-helix-helix domain (MatP_C) | MatP C-terminal ribbon-helix-helix domain | This family, many of whose members are YcbG, organises the macrodomain Ter of the chromosome of bacteria such as E coli. In these bacteria, insulated macrodomains influence the segregation of sister chromatids and the mobility of chromosomal DNA. Org ... | Domain | |
PF06303 | MatP N-terminal domain (MatP) | MatP N-terminal domain | This family, many of whose members are YcbG, organises the macrodomain Ter of the chromosome of bacteria such as E coli. In these bacteria, insulated macrodomains influence the segregation of sister chromatids and the mobility of chromosomal DNA. Org ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009390 | Macrodomain Ter protein, MatP | Family | |
IPR035375 | MatP, C-terminal ribbon-helix-helix domain | Domain | |
IPR013321 | Arc-type ribbon-helix-helix | Homologous Superfamily | |
IPR038339 | MatP, N-terminal domain superfamily | Homologous Superfamily | |
IPR035087 | MatP, N-terminal | Domain |