4CS8
Crystal structure of the asymmetric human metapneumovirus M2-1 tetramer, form 2
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | CCCH zinc finger-like | 8052494 | 3001741 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | VP30 CTD-like | 8052490 | 3002122 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CCCH zinc finger-like | 8052494 | 3001741 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | VP30 CTD-like | 8052490 | 3002122 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | CCCH zinc finger-like | 8052494 | 3001741 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | VP30 CTD-like | 8052490 | 3002122 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | CCCH zinc finger-like | 8052494 | 3001741 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | VP30 CTD-like | 8052490 | 3002122 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Pneumovirus_M2_C | e4cs8A2 | A: alpha arrays | X: Matrix protein 2-1 core domain (From Topology) | H: Matrix protein 2-1 core domain (From Topology) | T: Matrix protein 2-1 core domain | F: Pneumovirus_M2_C | ECOD (1.6) |
A | Pneumovirus_M2_N | e4cs8A1 | A: few secondary structure elements | X: CCCH zinc finger | H: CCCH zinc finger (From Topology) | T: CCCH zinc finger | F: Pneumovirus_M2_N | ECOD (1.6) |
B | Pneumovirus_M2_C | e4cs8B2 | A: alpha arrays | X: Matrix protein 2-1 core domain (From Topology) | H: Matrix protein 2-1 core domain (From Topology) | T: Matrix protein 2-1 core domain | F: Pneumovirus_M2_C | ECOD (1.6) |
B | Pneumovirus_M2_N | e4cs8B1 | A: few secondary structure elements | X: CCCH zinc finger | H: CCCH zinc finger (From Topology) | T: CCCH zinc finger | F: Pneumovirus_M2_N | ECOD (1.6) |
D [auth E] | Pneumovirus_M2_C | e4cs8E2 | A: alpha arrays | X: Matrix protein 2-1 core domain (From Topology) | H: Matrix protein 2-1 core domain (From Topology) | T: Matrix protein 2-1 core domain | F: Pneumovirus_M2_C | ECOD (1.6) |
D [auth E] | Pneumovirus_M2_N | e4cs8E1 | A: few secondary structure elements | X: CCCH zinc finger | H: CCCH zinc finger (From Topology) | T: CCCH zinc finger | F: Pneumovirus_M2_N | ECOD (1.6) |
C | Pneumovirus_M2_C | e4cs8C2 | A: alpha arrays | X: Matrix protein 2-1 core domain (From Topology) | H: Matrix protein 2-1 core domain (From Topology) | T: Matrix protein 2-1 core domain | F: Pneumovirus_M2_C | ECOD (1.6) |
C | Pneumovirus_M2_N | e4cs8C1 | A: few secondary structure elements | X: CCCH zinc finger | H: CCCH zinc finger (From Topology) | T: CCCH zinc finger | F: Pneumovirus_M2_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.120.1350 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Pneumovirus matrix protein 2 (M2), zinc-binding domain | CATH (4.3.0) |
B | 1.20.120.1350 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Pneumovirus matrix protein 2 (M2), zinc-binding domain | CATH (4.3.0) |
D [auth E] | 1.20.120.1350 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Pneumovirus matrix protein 2 (M2), zinc-binding domain | CATH (4.3.0) |
C | 1.20.120.1350 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Pneumovirus matrix protein 2 (M2), zinc-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B, D [auth E] | PF06436 | Pneumovirus matrix protein 2 (M2) (Pneumovirus_M2) | Pneumovirus matrix protein 2 (M2) | - | Family |
PF06436 | Pneumovirus matrix protein 2 (M2) (Pneumovirus_M2) | Pneumovirus matrix protein 2 (M2) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B, D [auth E] | IPR036855 | Zinc finger, CCCH-type superfamily | Homologous Superfamily |
A, B, D [auth E] | IPR009452 | Pneumovirus matrix 2-1 | Family |
A, B, D [auth E] | IPR000571 | Zinc finger, CCCH-type | Domain |
IPR036855 | Zinc finger, CCCH-type superfamily | Homologous Superfamily | |
IPR009452 | Pneumovirus matrix 2-1 | Family | |
IPR000571 | Zinc finger, CCCH-type | Domain |