4CKN
Structure of an N-terminal fragment of Leishmania SAS-6 containing parts of its coiled coil domain, F257E mutant
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8051829 | 3001319 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8051829 | 3001319 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8051829 | 3001319 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8051829 | 3001319 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e4cknA2 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A | F_UNCLASSIFIED | e4cknA1 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF22218 | e4cknA3 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF22218 | ECOD (1.6) |
B | F_UNCLASSIFIED | e4cknB2 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e4cknB1 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e4cknC2 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e4cknC1 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF22218 | e4cknC3 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF22218 | ECOD (1.6) |
D | F_UNCLASSIFIED | e4cknD2 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e4cknD1 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF22218 | e4cknD3 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF22218 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.210.20 | Mainly Beta | Beta Complex | Dna Repair Protein Xrcc4 | Chain: A, domain 1 | CATH (4.3.0) |
B | 2.170.210.20 | Mainly Beta | Beta Complex | Dna Repair Protein Xrcc4 | Chain: A, domain 1 | CATH (4.3.0) |
C | 2.170.210.20 | Mainly Beta | Beta Complex | Dna Repair Protein Xrcc4 | Chain: A, domain 1 | CATH (4.3.0) |
D | 2.170.210.20 | Mainly Beta | Beta Complex | Dna Repair Protein Xrcc4 | Chain: A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16531 | Centriolar protein SAS N-terminal domain (SAS-6_N) | Centriolar protein SAS N-terminal domain | This entry represents the N-terminal domain of the SAS-6 centriolar protein, both in C.elegans and in humans. The N-terminal domain is the region through which the 9 rod-shaped homodimers that SAS-6 forms on oligomerisation interact with each other. ... | Domain | |
PF22218 | SAS-6, C-terminal coiled coil (SAS-6_C_CC_2) | SAS-6, C-terminal coiled coil | This domain is found at the C-terminal end of SAS-6 from Leishmania major (Swiss:E9AFQ5) and similar sequences found in protists. SAS-6 is a centriolar protein that oligomerises through its coiled coil (CC) domain (this entry), forming a rod-like par ... | Domain |