The refined structure of catalase DR1998 from Deinococcus radiodurans at 2.6 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | d4cabd_ | Multi-domain proteins (alpha and beta) | Heme-dependent catalase-like | Heme-dependent catalase-like | automated matches | automated matches | (Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 ) [TaxId: 243230 ], | SCOPe (2.08) |
| C | d4cabc_ | Multi-domain proteins (alpha and beta) | Heme-dependent catalase-like | Heme-dependent catalase-like | automated matches | automated matches | (Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 ) [TaxId: 243230 ], | SCOPe (2.08) |
| B | d4cabb_ | Multi-domain proteins (alpha and beta) | Heme-dependent catalase-like | Heme-dependent catalase-like | automated matches | automated matches | (Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 ) [TaxId: 243230 ], | SCOPe (2.08) |
| A | d4caba_ | Multi-domain proteins (alpha and beta) | Heme-dependent catalase-like | Heme-dependent catalase-like | automated matches | automated matches | (Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 ) [TaxId: 243230 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | Heme-dependent catalase-like | 8068993 | 3001681 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Heme-dependent catalase-like | 8068993 | 3001681 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Heme-dependent catalase-like | 8068993 | 3001681 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Heme-dependent catalases | 8068992 | 4002736 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Heme-dependent catalase-like | 8068993 | 3001681 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | TetR_C_14 | e4cabD1 | A: alpha arrays | X: HTH | H: HTH | T: winged helix domain | F: TetR_C_14 | ECOD (v295.2) |
| C | TetR_C_14 | e4cabC1 | A: alpha arrays | X: HTH | H: HTH | T: winged helix domain | F: TetR_C_14 | ECOD (v295.2) |
| B | TetR_C_14 | e4cabB1 | A: alpha arrays | X: HTH | H: HTH | T: winged helix domain | F: TetR_C_14 | ECOD (v295.2) |
| A | TetR_C_14 | e4cabA1 | A: alpha arrays | X: HTH | H: HTH | T: winged helix domain | F: TetR_C_14 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 2.40.180.10 | Mainly Beta | Beta Barrel | Catalase HpII, Chain A, domain 1 | Catalase core domain | CATH (4.3.0) |
| C | 2.40.180.10 | Mainly Beta | Beta Barrel | Catalase HpII, Chain A, domain 1 | Catalase core domain | CATH (4.3.0) |
| B | 2.40.180.10 | Mainly Beta | Beta Barrel | Catalase HpII, Chain A, domain 1 | Catalase core domain | CATH (4.3.0) |
| A | 2.40.180.10 | Mainly Beta | Beta Barrel | Catalase HpII, Chain A, domain 1 | Catalase core domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| CATALASE |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR024711 | Catalase, mono-functional, haem-containing, clades 1 and 3 | Family | |
| IPR011614 | Catalase core domain | Domain | |
| IPR018028 | Catalase, mono-functional, haem-containing | Family | |
| IPR010582 | Catalase immune-responsive domain | Domain | |
| IPR002226 | Catalase haem-binding site | Binding Site | |
| IPR020835 | Catalase superfamily | Homologous Superfamily |